G145403


Basic Information

Item Value
gene id G145403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43226252 ~ 43226751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166893
GGGAGGGCAGTTCCTGCATGTCCTCTCCAACACCTGTTCACTGTGTTGAACACACCATGACCTCAGTCAGTGTATACGGTACAGTAACACAGACAGAACACCATTATTACTTGAAGCCCTCTAAACATGTGTAGTGAGTGACCCTGTCATGTTTAATCCCCTTCTGCACCTGCAGATAACCCTATATCATTACTTTACACACAGTGAACCTGTGTTATTAACTCCTTCTCTACAATCCCTGTACAACGGCCCAGGAAAACCATTGGGTCGTGTTAATTTAGGCATACCGACAAAAGGACGGACAACAAAAACAAGTGTCTTATTGGGCAAATTCAGGTAGTGCCTTGCTGATTACCTACATCTCCTTCCATtctgtgcctaatgaacatggccCAAGTTAGAGCAACAAAGGGACTGCTGGACCTAataaagagggacagagggaaatACCATATAGACTGAAGAGGATGAGATGACATAGCAGGCTGGTTCTCTAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166893 True 500 lncRNA 0.45 1 43226252 43226751

Neighbor

gene id symbol gene type direction distance location
LOC110490122 LOC106605034 coding upstream 128398 43091038 ~ 43097854 (+)
LOC100301866 LOC106584110 coding upstream 183773 43025400 ~ 43042479 (+)
LOC110490064 LOC106605040 coding upstream 248248 42975400 ~ 42978004 (+)
LOC110490056 LOC106605039 coding upstream 251098 42971015 ~ 42975154 (+)
LOC110501569 mms22l coding upstream 315509 42878213 ~ 42910743 (+)
LOC110490166 LOC106605016 coding downstream 43915 43270666 ~ 43275284 (+)
LOC110490176 NA coding downstream 124376 43351127 ~ 43353661 (+)
LOC110501584 NA coding downstream 324831 43551582 ~ 43558937 (+)
LOC110490199 NA coding downstream 343539 43570290 ~ 43596359 (+)
LOC110501593 pigv coding downstream 370563 43597314 ~ 43599427 (+)
G145402 NA non-coding upstream 237 43225797 ~ 43226015 (+)
G145342 NA non-coding upstream 40908 43135470 ~ 43185344 (+)
G145341 NA non-coding upstream 91021 43134988 ~ 43135231 (+)
G145334 NA non-coding upstream 98521 43127223 ~ 43127731 (+)
G145332 NA non-coding upstream 100987 43124991 ~ 43125265 (+)
G145411 NA non-coding downstream 16750 43243501 ~ 43243768 (+)
G145415 NA non-coding downstream 22286 43249037 ~ 43249286 (+)
G145420 NA non-coding downstream 83417 43310168 ~ 43359884 (+)
G145493 NA non-coding downstream 175708 43402459 ~ 43402945 (+)
G145508 NA non-coding downstream 198686 43425437 ~ 43425641 (+)
G144661 NA other upstream 660222 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1256935 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1684661 41539240 ~ 41541654 (+)
G139179 NA other upstream 5174508 38051359 ~ 38051744 (+)
G139101 NA other upstream 5282240 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 504121 43730872 ~ 43731218 (+)
G146091 NA other downstream 541956 43768707 ~ 43769162 (+)
G146114 NA other downstream 572653 43799404 ~ 43799853 (+)
G146165 NA other downstream 659845 43886596 ~ 43889609 (+)
G146226 NA other downstream 770029 43996780 ~ 43997065 (+)

Expression


Co-expression Network