G146042 (LOC106605010)


Basic Information

Item Value
gene id G146042
gene name LOC106605010
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43719356 ~ 43719858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167612
CCCTTCCCTCCTCTGCGGACGCGTGCCGGGGGAGGGTGGGCTTCCATGCTGTCTCAGTGGGGCGACTCCTCCTTCCGTCCTCTGATGGCGCCTTCTGCAGGCCCGGCCGCTTGTCTCCGTCAGAAAGGTGTAGTCTGCCCCCACGTCTACCCTCCTCCTGTCCCATCCCCTGCACCTGGCCCATCACCTGGCCCTGCCAGGCCATGTTAGACTTCCCCTCCCCCTGGGACCGTCCTCCACCTCCTCGCTGGCCCTCCTCCTGATGTCCGGAGCCTCTGGGGCCACCCTGGTCCCCATGGCGGTCTACATCCGGGGGGAAGCGGACCCTGCGGTCCTCTGGCTGGGGCAGCCAGGCTGGGTTAATCTTAAAGTCTGAGGGGTTCACCCCAGAGTCTGAAGGGGGTCTTGTCTGGTTCTCCTGCCCTcttccccctccaccacctccacccacGGGCAGGGTGTGGCCATTCTTCACGTAGGGCTGCTTGGGGCTGTGAGGATCG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167612 True 503 lncRNA 0.66 1 43719356 43719858

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 67604 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 119929 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 122997 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 160419 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 365695 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 227230 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 235191 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 745116 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 831305 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1483451 45203309 ~ 45255843 (+)
G146039 NA non-coding upstream 3447 43706769 ~ 43715909 (+)
G145513 NA non-coding upstream 288421 43430711 ~ 43430935 (+)
G145508 NA non-coding upstream 293715 43425437 ~ 43425641 (+)
G145493 NA non-coding upstream 316411 43402459 ~ 43402945 (+)
G145420 NA non-coding upstream 359472 43310168 ~ 43359884 (+)
G146050 NA non-coding downstream 3005 43722863 ~ 43723100 (+)
G146043 NA non-coding downstream 3980 43723838 ~ 43724222 (+)
G146053 NA non-coding downstream 9663 43729521 ~ 43729792 (+)
G146055 NA non-coding downstream 11707 43731565 ~ 43731774 (+)
G146060 NA non-coding downstream 15913 43735771 ~ 43736190 (+)
G144661 NA other upstream 1153326 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1750039 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2177765 41539240 ~ 41541654 (+)
G139179 NA other upstream 5667612 38051359 ~ 38051744 (+)
G139101 NA other upstream 5775344 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 11014 43730872 ~ 43731218 (+)
G146091 NA other downstream 48849 43768707 ~ 43769162 (+)
G146114 NA other downstream 79546 43799404 ~ 43799853 (+)
G146165 NA other downstream 166738 43886596 ~ 43889609 (+)
G146226 NA other downstream 276922 43996780 ~ 43997065 (+)

Expression


Co-expression Network