G147353


Basic Information

Item Value
gene id G147353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44628119 ~ 44628374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169035
agacagacagacagacagacacagacaaagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacagacaaagacagacagacagacagacagacagacagacagacaaagacagacagacagacagacaaagacagacagacagacagacagacagacagacagacagacagacagacagacagacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169035 True 256 lncRNA 0.25 1 44628119 44628374

Neighbor

gene id symbol gene type direction distance location
LOC110490437 LOC106584212 coding upstream 74140 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 155195 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 667127 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 677772 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 976367 43630465 ~ 43651752 (+)
LOC110490546 LOC106560730 coding downstream 574935 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 815699 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 967629 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 1070823 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 2337762 46966136 ~ 46980755 (+)
G147349 NA non-coding upstream 10974 44615062 ~ 44617145 (+)
G147347 NA non-coding upstream 15200 44609708 ~ 44612919 (+)
G147348 NA non-coding upstream 16235 44611222 ~ 44611884 (+)
G147346 NA non-coding upstream 20092 44607673 ~ 44608027 (+)
G146850 NA non-coding upstream 185932 44441870 ~ 44442187 (+)
G147355 NA non-coding downstream 11425 44639799 ~ 44645208 (+)
G147356 NA non-coding downstream 13287 44641661 ~ 44651924 (+)
G147363 NA non-coding downstream 25038 44653412 ~ 44653661 (+)
G147364 NA non-coding downstream 34421 44662795 ~ 44672122 (+)
G147368 NA non-coding downstream 43924 44672298 ~ 44672558 (+)
G146841 NA other upstream 198726 44429153 ~ 44429393 (+)
G146226 NA other upstream 631054 43996780 ~ 43997065 (+)
G146165 NA other upstream 738510 43886596 ~ 43889609 (+)
G146114 NA other upstream 828266 43799404 ~ 43799853 (+)
G146091 NA other upstream 858957 43768707 ~ 43769162 (+)
G147510 NA other downstream 242426 44870800 ~ 44871500 (+)
G148191 NA other downstream 843708 45472082 ~ 45492379 (+)
uevld uevld other downstream 2353345 46981686 ~ 47007672 (+)
G150997 NA other downstream 2869574 47497948 ~ 47547579 (+)
G152167 NA other downstream 3928408 48556782 ~ 48557686 (+)

Expression


Co-expression Network