G149158


Basic Information

Item Value
gene id G149158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46572352 ~ 46572611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU171007
ATAGAGGAGAGAGCGGCCATGCCAGACATTTTTATCTCAGTAAATAAACTATGCATTCTGCCAGTAAAGCCTGTGGCGTCAGGGGACATATTTCCCTCCTTCCTACTCACACCTTTTTAttttccttctctttttctctctctgtcttttaacTTCCCTGGTCATCCTCAGACCCGGGGAGAAGTCAGGCACCATCTCTCATCTCAGACaaggtgtgtgtgcatatgtgcatatgtgcgtgtgtgctgcttgcgtatgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171007 True 260 lncRNA 0.47 1 46572352 46572611

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 440238 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 816369 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 1103507 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1316509 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 2018373 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 393525 46966136 ~ 46980755 (+)
uevld uevld coding downstream 409075 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 561604 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 795569 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1454798 48027409 ~ 48133974 (+)
G149154 NA non-coding upstream 3893 46568219 ~ 46568459 (+)
G149151 NA non-coding upstream 8150 46563954 ~ 46564202 (+)
G149144 NA non-coding upstream 17091 46555023 ~ 46555261 (+)
G149098 NA non-coding upstream 73413 46491577 ~ 46498939 (+)
G149049 NA non-coding upstream 138985 46424221 ~ 46433367 (+)
G149167 NA non-coding downstream 9801 46582412 ~ 46634067 (+)
G150150 NA non-coding downstream 218377 46790988 ~ 46791374 (+)
G150186 NA non-coding downstream 239346 46811957 ~ 46812248 (+)
G150210 NA non-coding downstream 269693 46842304 ~ 46842593 (+)
G150211 NA non-coding downstream 270280 46842891 ~ 46843203 (+)
G148191 NA other upstream 1079973 45472082 ~ 45492379 (+)
G147510 NA other upstream 1700852 44870800 ~ 44871500 (+)
G146841 NA other upstream 2142959 44429153 ~ 44429393 (+)
G146226 NA other upstream 2575287 43996780 ~ 43997065 (+)
G146165 NA other upstream 2682743 43886596 ~ 43889609 (+)
G150997 NA other downstream 925337 47497948 ~ 47547579 (+)
G152167 NA other downstream 1984171 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3525805 50098387 ~ 50100624 (+)
G154859 NA other downstream 4592804 51165415 ~ 51167174 (+)

Expression


Co-expression Network