G155491


Basic Information

Item Value
gene id G155491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51410337 ~ 51410863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177852
acttcagtattccatagtaacatttgACAAAACTATCTAAAGACActaaagcagcaaactttgtggaaattaatatttgtgtcattctcaacttttggccacgactgtacaaagcgttgtacaagatcttcagtttcttggcaatttcacgcatggaatagccttcatttctcagaacaagaatagactgatgagtttcagaggaaagttatttgtttctggccattttgagcctgtaatcgaacccacaaatgatgatgctccagatactcaactaatcttaaggccaattttattgctgctttaatcagaacagttttcagctgtgctaacataattacaaaagggttttctaatgataaattagccttttaaaatgattaactttagctaacacaatgtgccattggaacccagaagtgatggttgctgaataTGGTGCCTCTGTACACCAATGTTGatgttccataaaaaatctgccgtttccagctacaatagtcatttacaacattaacaatgtctacact

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU177852 True 527 lncRNA 0.33 1 51410337 51410863

Neighbor

gene id symbol gene type direction distance location
LOC110491314 LOC106560671 coding upstream 4722 51375324 ~ 51405615 (+)
LOC110501653 LOC106560673 coding upstream 70800 51317121 ~ 51339537 (+)
LOC110491302 LOC106560674 coding upstream 115591 51247741 ~ 51294746 (+)
LOC110491287 LOC106602850 coding upstream 173778 51233705 ~ 51236559 (+)
LOC110491269 LOC106560677 coding upstream 273437 51114207 ~ 51136900 (+)
rl28 rl28 coding downstream 1258 51412121 ~ 51417154 (+)
LOC118944199 NA coding downstream 10993 51421856 ~ 51422029 (+)
LOC118944142 NA coding downstream 11474 51422337 ~ 51422453 (+)
LOC118944140 NA coding downstream 18591 51429454 ~ 51429572 (+)
cspg4 cspg4 coding downstream 1492328 52903191 ~ 53018812 (+)
G155489 NA non-coding upstream 10123 51387977 ~ 51400214 (+)
G155515 NA non-coding upstream 54871 51350626 ~ 51355466 (+)
G154901 NA non-coding upstream 110483 51294802 ~ 51299854 (+)
G154817 NA non-coding upstream 262440 51145536 ~ 51147897 (+)
G154837 NA non-coding upstream 298562 51111535 ~ 51111775 (+)
G155492 NA non-coding downstream 20003 51430866 ~ 51501997 (+)
G155845 NA non-coding downstream 181979 51592842 ~ 51593164 (+)
G155940 LOC106613263 non-coding downstream 316658 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding downstream 405647 51816510 ~ 51824182 (+)
G156027 NA non-coding downstream 454609 51865472 ~ 51889131 (+)
G154859 NA other upstream 243163 51165415 ~ 51167174 (+)
LOC110491026 LOC106560691 other upstream 1309863 50098387 ~ 50100624 (+)
G152167 NA other upstream 2852651 48556782 ~ 48557686 (+)
G150997 NA other upstream 3862758 47497948 ~ 47547579 (+)
G155541 NA other downstream 9984 51420847 ~ 51421122 (+)
G158778 LOC106560766 other downstream 2610745 54021608 ~ 54021904 (+)
G159415 NA other downstream 2942120 54352983 ~ 54353388 (+)

Expression


Co-expression Network