G156900


Basic Information

Item Value
gene id G156900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52339983 ~ 52380989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179325
cagcctagtccacttgttgaaacagctcttattcgatacccttccacaatagaagcctcaaacaactttctaaagactgttgacatctgctggaagccttgggaagtgcaatctggccccatagacacagcatattggataggcaatcacttaaatgaaactacaaacctcagatttcccacttccgggttggatttgtctcaggttttcgcctgccatatcagttatgttatactcacagacattattttaacagtttcgaaactttagagtgttttctatccaattatatgcatatcctagcttctggacctgagtaacaggcagtttactttgggcacacttctCATCCAGACgtcgaaatactgcccccaagccataagaagttaacccaGCTGAGGTACCTGAGAACTCTGAGAGAACCACATTTAGAgcaaaaagtattttttttacctCCCTACTGAAATACAAACAGAAGCACAAATCCTATGATAACCTGAGTTAGCGCAAGTGAGTAGC

Function

NR:

description
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179325 True 519 lncRNA 0.37 2 52339983 52380989

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 910411 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 917530 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 917954 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 922829 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 934368 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 522202 52903191 ~ 53018812 (+)
snupn snupn coding downstream 752508 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 824092 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 871819 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 970111 53351100 ~ 53370380 (+)
G156864 NA non-coding upstream 45002 52294772 ~ 52294981 (+)
G156858 NA non-coding upstream 49781 52290000 ~ 52290202 (+)
G156829 NA non-coding upstream 69265 52270307 ~ 52270718 (+)
G156828 NA non-coding upstream 69918 52269795 ~ 52270065 (+)
G156812 NA non-coding upstream 80914 52258771 ~ 52259069 (+)
G157095 NA non-coding downstream 86577 52467566 ~ 52468071 (+)
G157099 NA non-coding downstream 87171 52468160 ~ 52468366 (+)
G157111 NA non-coding downstream 99014 52480003 ~ 52480208 (+)
G157139 NA non-coding downstream 114706 52495695 ~ 52495896 (+)
G157143 NA non-coding downstream 116517 52497506 ~ 52526149 (+)
G156000 LOC106560791 other upstream 515801 51816510 ~ 51824182 (+)
G155541 NA other upstream 918861 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 1017550 51317121 ~ 51339537 (+)
G154859 NA other upstream 1172809 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1640619 54021608 ~ 54021904 (+)
G159415 NA other downstream 1971994 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2347307 54728296 ~ 54728860 (+)
G160569 NA other downstream 3565154 55946143 ~ 55947245 (+)
G161687 NA other downstream 3864055 56245044 ~ 56252598 (+)

Expression


Co-expression Network