G159507


Basic Information

Item Value
gene id G159507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54530785 ~ 54530990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU182066
gccttgggaagtgcaacttgaccccATATGCACTGTGTATtcagtaggccaagctttgaaaaactacaaacctcagatttcccacttcctggttggatttttctcaggttttcgcctgccatgtgagttctgttatactcacagacatcattcaaacagttttagaaacttcagagtgttttctatccaataccaatactaataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182066 True 206 lncRNA 0.40 1 54530785 54530990

Neighbor

gene id symbol gene type direction distance location
calml4b calml4 coding upstream 26189 54491725 ~ 54504596 (+)
cln6b cln6 coding upstream 43876 54474023 ~ 54486909 (+)
itga11b itga11 coding upstream 74831 54364918 ~ 54455954 (+)
dgkzb LOC106560764 coding upstream 339198 54100767 ~ 54191587 (+)
kcnj11l irk11 coding upstream 561622 53941853 ~ 53969163 (+)
spg11 spg11 coding downstream 321822 54852812 ~ 54944780 (+)
LOC110491832 LOC106560753 coding downstream 420911 54951901 ~ 54976149 (+)
LOC118940499 NA coding downstream 469449 55000439 ~ 55024185 (+)
znf609a LOC106560750 coding downstream 710410 55241400 ~ 55426308 (+)
LOC110491849 LOC106560749 coding downstream 947557 55478547 ~ 55535685 (+)
G159466 NA non-coding upstream 41378 54488779 ~ 54489407 (+)
G159417 NA non-coding upstream 176454 54354056 ~ 54354331 (+)
G159412 NA non-coding upstream 179063 54346852 ~ 54351722 (+)
G159407 NA non-coding upstream 186410 54344009 ~ 54344375 (+)
G159405 NA non-coding upstream 186837 54343670 ~ 54343948 (+)
G159697 NA non-coding downstream 63270 54594260 ~ 54594503 (+)
G159896 NA non-coding downstream 204810 54735800 ~ 54736001 (+)
G159923 NA non-coding downstream 221177 54752167 ~ 54752497 (+)
G159940 NA non-coding downstream 230341 54761331 ~ 54761557 (+)
G159949 NA non-coding downstream 237834 54768824 ~ 54847968 (+)
G159415 NA other upstream 177397 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 508881 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 2706603 51816510 ~ 51824182 (+)
G155541 NA other upstream 3109663 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 3113667 51412121 ~ 51417154 (+)
G159889 LOC106562215 other downstream 197306 54728296 ~ 54728860 (+)
G160569 NA other downstream 1415153 55946143 ~ 55947245 (+)
G161687 NA other downstream 1714054 56245044 ~ 56252598 (+)
G162130 NA other downstream 2517324 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 3397160 57928150 ~ 57931991 (+)

Expression


Co-expression Network