G163591


Basic Information

Item Value
gene id G163591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 58116793 ~ 58176299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU186619
ggcgcacccatctacagggtccgtaggattttggacatgcgtcctcggggccgtggtcaccagtacctcgtagattgggaggggtacggtcctgaggagaggagttgggttccctctcgggacgtgctggaccgtgcgctgatcgatgatttcctccgttgccgccaggtttcctcctcgagtgcgccaggaggcgctcggtgagtgggggggtagtgtcatgttgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttatgttaccttttctccccctcttttccccagctgtgccttgtctcctcctaattacccattcacc

Function

NR:

description
lipoxygenase homology domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186619 True 342 lncRNA 0.58 2 58116793 58176299

Neighbor

gene id symbol gene type direction distance location
LOC110492604 LOC106561042 coding upstream 5613 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 7350 58040338 ~ 58109443 (+)
LOC110492531 LOC106561047 coding upstream 319159 57795263 ~ 57797634 (+)
LOC110492500 LOC106561050 coding upstream 327398 57667227 ~ 57789395 (+)
ush1c LOC106561052 coding upstream 461197 57606860 ~ 57655596 (+)
LOC110492647 LOC106561039 coding downstream 77305 58253604 ~ 58296746 (+)
LOC110492681 LOC106561133 coding downstream 139978 58316277 ~ 58322551 (+)
LOC110492721 LOC106561036 coding downstream 621084 58797383 ~ 59033367 (+)
LOC118937284 LOC106609580 coding downstream 1211651 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 1225878 59402177 ~ 59643249 (+)
G163544 NA non-coding upstream 117298 57995304 ~ 57999495 (+)
G163499 NA non-coding upstream 143014 57903837 ~ 57973779 (+)
G163464 NA non-coding upstream 271356 57845123 ~ 57845437 (+)
G163438 NA non-coding upstream 321931 57794549 ~ 57794862 (+)
G163362 NA non-coding upstream 324379 57789707 ~ 57792414 (+)
G163662 LOC106561040 non-coding downstream 40692 58216991 ~ 58223485 (+)
G164289 NA non-coding downstream 319893 58496192 ~ 58497512 (+)
G164304 NA non-coding downstream 327749 58504048 ~ 58504313 (+)
G164307 NA non-coding downstream 329581 58505880 ~ 58506095 (+)
G164312 NA non-coding downstream 333010 58509309 ~ 58509560 (+)
G163513 LOC106561046 other upstream 184802 57928150 ~ 57931991 (+)
G162130 NA other upstream 1063151 57048314 ~ 57053642 (+)
G161687 NA other upstream 1864195 56245044 ~ 56252598 (+)
G160569 NA other upstream 2169548 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 3387933 54728296 ~ 54728860 (+)
G163660 LOC106561040 other downstream 39378 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 1769409 59945708 ~ 59953165 (+)
G166878 NA other downstream 2339333 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 2675133 60851417 ~ 60866455 (+)
G167288 NA other downstream 2886294 61062593 ~ 61074591 (+)

Expression


Co-expression Network