antol (lin37)


Basic Information

Item Value
gene id antol
gene name lin37
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14508406 ~ 14511632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039678.1
CTAGAAAAAGTTGGTAAGTGACAGACATTGATTTGAACCAATGATGGTCGACTCCACATTGTCCAACCAGCAGAAAGGAAACGACCTGCGCGCGGAAGAGGAAAGTCCACTGAAACAAATCCGACCACCGAGGGGTAGACTGATCATGCATCACGTCAAGATTAAGACTGAGAAGCCAGaTGCAGAGGAGAGTGGTGCACGCAGCCGACTGGATGCAGTATTACAGGGGCTGGTAGAGAAGAGTGACAGtgagagGGAGCAAAATGAAGATGAGACAAAGATGGCAGAAGACTCTCTGAGCAAGGATGTGTCTCCATCTTCTGCTGGGAAGCGGCCATCATCACGGTTCCCACAGCACCGGAGGAAGAAACGGAAAGAGATGGATGATAGCTTAACGGAGAGCAACCAACATAAACAAAATGCCTACATTATCAAGTTGTTTGACCGCAGTGTGGACCTGGCCCAGTACACTACCAGTACCCCACTTTACCCCATTTGCCGGGCCTGGATGAGGAACAACccggcagtcagagagagagctgcatccCCAAGCCCCCCACACAGCATGGGGGAAGAGGAGGCTGCAGACATGCTCAATGGTAAGGGACAGAATGTGTATCGCCTCCCTCCGCCCACCTCCTGTCCTCTTAACCCTTCTGGAGATCCTGTCAATCTGAGGATCCCATCCACAGAAAAGCCTATTGTCAGCAAGTCTACAGATACAGCTCTTGTGTCTGGTCCCCTCATATACAACCACATAGAACGCTGGAAAAAGATCAGGCAAAAATGGAAAGAAGCGTCCAACAAGAATCAGCTGAGGTATAGCGAGAGCATCAAGATCCTGAAAGAGATGAAGGAGATGTACGACCGCTAGCTGGGAATCCCCCAGGCAGTATCCCacagcagagggaggagaaaagaatAGAGCAGGTCAGAAACACAGTCCACATGGAAGAAATGGGTCCAAGATATCTATCACATACAGGCAATAAATGTTCTGTTTGTTTTGGATCACAAAAGGAATGTTGTCTGAAGTAAAACATTTGTAAGTGTTTTTCTTTGGTCAGATTTCAAAGAGTCCTTTCAGGAGTCAACTCTTATATTAGCTACAAGCAAAATATAAATTAATAAATTACCTTAAGaggtt
>XM_021581777.2
AACCAGGCAGCTAGTTAGTTGTTGGAGGGGGTAGACTGATCATGCATCACGTCAAGATTAAGACTGAGAAGCCAGAGGAGAGTGGTGCACGCAGCCGACTGGATGCAGTATTACAGGGGCTGGTAGAGAAGAGTGACAGtgagagGGAGCAAAATGAAGATGAGACAAAGATGGCAGAAGACTCTCTGAGCAAGGATGTGTCTCCATCTTCTGCTGGGAAGCGGCCATCATCACGGTTCCCACAGCACCGGAGGAAGAAACGGAAAGAGATGGATGATAGCTTAACGGAGAGCAACCAACATAAACAAAATGCCTACATTATCAAGTTGTTTGACCGCAGTGTGGACCTGGCCCAGTACACTACCAGTACCCCACTTTACCCCATTTGCCGGGCCTGGATGAGGAACAACccggcagtcagagagagagctgcatccCCAAGCCCCCCACACAGCATGGGGGAAGAGGAGGCTGCAGACATGCTCAATGGTAAGGGACAGAATGTGTATCGCCTCCCTCCGCCCACCTCCTGTCCTCTTAACCCTTCTGGAGATCCTGTCAATCTGAGGATCCCATCCACAGAAAAGCCTATTGTCAGCAAGTCTACAGATACAGCTCTTGTGTCTGGTCCCCTCATATACAACCACATAGAACGCTGGAAAAAGATCAGGCAAAAATGGAAAGAAGCGTCCAACAAGAATCAGCTGAGGTATAGCGAGAGCATCAAGATCCTGAAAGAGATGAAGGAGATGTACGACCGCTAGCTGGGAATCCCCCAGGCAGTATCCCacagcagagggaggagaaaagaatAGAGCAGGTAGGAGCCACGAGCAAGTCATCTACCCCAGGACGCTGCACTAGTCCTCTCCCCAAGGAGGACATTACGTGTGACAATGTCAGAGGAGCCTCATGGAGGTCATTTCTACCATAAACTGCCACAATTAGGGACCCAAAGTTCTCGTTTTGAAAAAATGTAGCAATACTTTCAGTAAGTTGATGCTTCTGGTGGGCCCAAGTTCATCTGTTTAAATAATTATTACATGTTTTTTGTCATATTACAGAATATCTGGTAATGCATTATATAGTCTGTTGTCTGACACAACAATGTGTCATGAAAAGTTTGTAAACAGGTTGAGTAGTGTGCAACATTTGTCTAAATTCCGGAATACTCTAAATTAATTCCAGGCTTCCAGTggtaaatatttgtattttagGATCACCAGTTTCCCAGACAAGCAGTGCTCTTATGAATCTTTTTTTTGTTTAAACATTCAAAAGAAAAGTCTCTCACGCATCTAAAATTTTAagtaaactgtaaaaaaaaaaaaaaaaaaagttgtaaagaGCTATTGTAATTTATTCATCGCTATAATATATCTGCCAGTGCTGTTTTTACAATTGATTGATTTCTGAAATGTAATTTCTCCACAAAGGATTTCTCCACAGCAGTTATTTTGGGTTTTTCAGAAGGATCTTGTCATTTGCAGGTCAGAAACACAGTCCACATGGAAGAAATGGGTCCAAGATATCTATCACATACAGGCAATAAATGTTCTGTTTGTTTTGGATCACAAAAGGAATGTTGTCTGAAGTAAAACATTTGTAAGTGTTTTTCTTTGGTCAGATTTCAAAGAGTCCTTTCAGGAGTCAACTCTTATATTAGCTACAAGCAAAATATAAATTAATAAATTACCTTAA
>XM_021581762.2
CTAGAAAAAGTTGGTAAGTGACAGACATTGATTTGAACCAATGATGGTCGACTCCACATTGTCCAACCAGCAGAAAGGAAACGACCTGCGCGCGGAAGAGGAAAGTCCACTGAAACAAATCCGACCACCGAGGGGTAGACTGATCATGCATCACGTCAAGATTAAGACTGAGAAGCCAGaTGCAGAGGAGAGTGGTGCACGCAGCCGACTGGATGCAGTATTACAGGGGCTGGTAGAGAAGAGTGACAGtgagagGGAGCAAAATGAAGATGAGACAAAGATGGCAGAAGACTCTCTGAGCAAGGATGTGTCTCCATCTTCTGCTGGGAAGCGGCCATCATCACGGTTCCCACAGCACCGGAGGAAGAAACGGAAAGAGATGGATGATAGCTTAACGGAGAGCAACCAACATAAACAAAATGCCTACATTATCAAGTTGTTTGACCGCAGTGTGGACCTGGCCCAGTACACTACCAGTACCCCACTTTACCCCATTTGCCGGGCCTGGATGAGGAACAACccggcagtcagagagagagctgcatccCCAAGCCCCCCACACAGCATGGGGGAAGAGGAGGCTGCAGACATGCTCAATGGTAAGGGACAGAATGTGTATCGCCTCCCTCCGCCCACCTCCTGTCCTCTTAACCCTTCTGGAGATCCTGTCAATCTGAGGATCCCATCCACAGAAAAGCCTATTGTCAGCAAGTCTACAGATACAGCTCTTGTGTCTGGTCCCCTCATATACAACCACATAGAACGCTGGAAAAAGATCAGGCAAAAATGGAAAGAAGCGTCCAACAAGAATCAGCTGAGGTATAGCGAGAGCATCAAGATCCTGAAAGAGATGAAGGAGATGTACGACCGCTAGCTGGGAATCCCCCAGGCAGTATCCCacagcagagggaggagaaaagaatAGAGCAGGTAGGAGCCACGAGCAAGTCATCTACCCCAGGACGCTGCACTAGTCCTCTCCCCAAGGAGGACATTACGTGTGACAATGTCAGAGGAGCCTCATGGAGGTCATTTCTACCATAAACTGCCACAATTAGGGACCCAAAGTTCTCGTTTTGAAAAAATGTAGCAATACTTTCAGTAAGTTGATGCTTCTGGTGGGCCCAAGTTCATCTGTTTAAATAATTATTACATGTTTTTTGTCATATTACAGAATATCTGGTAATGCATTATATAGTCTGTTGTCTGACACAACAATGTGTCATGAAAAGTTTGTAAACAGGTTGAGTAGTGTGCAACATTTGTCTAAATTCCGGAATACTCTAAATTAATTCCAGGCTTCCAGTggtaaatatttgtattttagGATCACCAGTTTCCCAGACAAGCAGTGCTCTTATGAATCTTTTTTTTGTTTAAACATTCAAAAGAAAAGTCTCTCACGCATCTAAAATTTTAagtaaactgtaaaaaaaaaaaaaaaaaaagttgtaaagaGCTATTGTAATTTATTCATCGCTATAATATATCTGCCAGTGCTGTTTTTACAATTGATTGATTTCTGAAATGTAATTTCTCCACAAAGGATTTCTCCACAGCAGTTATTTTGGGTTTTTCAGAAGGATCTTGTCATTTGCAGGTCAGAAACACAGTCCACATGGAAGAAATGGGTCCAAGATATCTATCACATACAGGCAATAAATGTTCTGTTTGTTTTGGATCACAAAAGGAATGTTGTCTGAAGTAAAACATTTGTAAGTGTTTTTCTTTGGTCAGATTTCAAAGAGTCCTTTCAGGAGTCAACTCTTATATTAGCTACAAGCAAAATATAAATTAATAAATTACCTTAA
>XM_021581769.2
CTAGAAAAAGTTGGTAAGTGACAGACATTGATTTGAACCAATGATGGTCGACTCCACATTGTCCAACCAGCAGAAAGGAAACGACCTGCGCGCGGAAGAGGAAAGTCCACTGAAACAAATCCGACCACCGAGGGGTAGACTGATCATGCATCACGTCAAGATTAAGACTGAGAAGCCAGAGGAGAGTGGTGCACGCAGCCGACTGGATGCAGTATTACAGGGGCTGGTAGAGAAGAGTGACAGtgagagGGAGCAAAATGAAGATGAGACAAAGATGGCAGAAGACTCTCTGAGCAAGGATGTGTCTCCATCTTCTGCTGGGAAGCGGCCATCATCACGGTTCCCACAGCACCGGAGGAAGAAACGGAAAGAGATGGATGATAGCTTAACGGAGAGCAACCAACATAAACAAAATGCCTACATTATCAAGTTGTTTGACCGCAGTGTGGACCTGGCCCAGTACACTACCAGTACCCCACTTTACCCCATTTGCCGGGCCTGGATGAGGAACAACccggcagtcagagagagagctgcatccCCAAGCCCCCCACACAGCATGGGGGAAGAGGAGGCTGCAGACATGCTCAATGGTAAGGGACAGAATGTGTATCGCCTCCCTCCGCCCACCTCCTGTCCTCTTAACCCTTCTGGAGATCCTGTCAATCTGAGGATCCCATCCACAGAAAAGCCTATTGTCAGCAAGTCTACAGATACAGCTCTTGTGTCTGGTCCCCTCATATACAACCACATAGAACGCTGGAAAAAGATCAGGCAAAAATGGAAAGAAGCGTCCAACAAGAATCAGCTGAGGTATAGCGAGAGCATCAAGATCCTGAAAGAGATGAAGGAGATGTACGACCGCTAGCTGGGAATCCCCCAGGCAGTATCCCacagcagagggaggagaaaagaatAGAGCAGGTAGGAGCCACGAGCAAGTCATCTACCCCAGGACGCTGCACTAGTCCTCTCCCCAAGGAGGACATTACGTGTGACAATGTCAGAGGAGCCTCATGGAGGTCATTTCTACCATAAACTGCCACAATTAGGGACCCAAAGTTCTCGTTTTGAAAAAATGTAGCAATACTTTCAGTAAGTTGATGCTTCTGGTGGGCCCAAGTTCATCTGTTTAAATAATTATTACATGTTTTTTGTCATATTACAGAATATCTGGTAATGCATTATATAGTCTGTTGTCTGACACAACAATGTGTCATGAAAAGTTTGTAAACAGGTTGAGTAGTGTGCAACATTTGTCTAAATTCCGGAATACTCTAAATTAATTCCAGGCTTCCAGTggtaaatatttgtattttagGATCACCAGTTTCCCAGACAAGCAGTGCTCTTATGAATCTTTTTTTTGTTTAAACATTCAAAAGAAAAGTCTCTCACGCATCTAAAATTTTAagtaaactgtaaaaaaaaaaaaaaaaaaagttgtaaagaGCTATTGTAATTTATTCATCGCTATAATATATCTGCCAGTGCTGTTTTTACAATTGATTGATTTCTGAAATGTAATTTCTCCACAAAGGATTTCTCCACAGCAGTTATTTTGGGTTTTTCAGAAGGATCTTGTCATTTGCAGGTCAGAAACACAGTCCACATGGAAGAAATGGGTCCAAGATATCTATCACATACAGGCAATAAATGTTCTGTTTGTTTTGGATCACAAAAGGAATGTTGTCTGAAGTAAAACATTTGTAAGTGTTTTTCTTTGGTCAGATTTCAAAGAGTCCTTTCAGGAGTCAACTCTTATATTAGCTACAAGCAAAATATAAATTAATAAATTACCTTAA
>NM_001165044.1
AAACAAATCCGACCACCGAGGTAACCAACCAGGCAGCTAGTTAGTTGTTGGAGGGGGTAGACTGATCATGCATCACGTCAAGATTAAGACTGAGAAGCCAGaTGCAGAGGAGAGTGGTGCACGCAGCCGACTGGATGCAGTATTACAGGGGCTGGTAGAGAAGAGTGACAGtgagagGGAGCAAAATGAAGATGAGACAAAGATGGCAGAAGACTCTCTGAGCAAGGATGTGTCTCCATCTTCTGCTGGGAAGCGGCCATCATCACGGTTCCCACAGCACCGGAGGAAGAAACGGAAAGAGATGGATGATAGCTTAACGGAGAGCAACCAACATAAACAAAATGCCTACATTATCAAGTTGTTTGACCGCAGTGTGGACCTGGCCCAGTACACTACCAGTACCCCACTTTACCCCATTTGCCGGGCCTGGATGAGGAACAACccggcagtcagagagagagctgcatccCCAAGCCCCCCACACAGCATGGGGGAAGAGGAGGCTGCAGACATGCTCAATGGTAAGGGACAGAATGTGTATCGCCTCCCTCCGCCCACCTCCTGTCCTCTTAACCCTTCTGGAGATCCTGTCAATCTGAGGATCCCATCCACAGAAAAGCCTATTGTCAGCAAGTCTACAGATACAGCTCTTGTGTCTGGTCCCCTCATATACAACCACATAGAACGCTGGAAAAAGATCAGGCAAAAATGGAAAGAAGCGTCCAACAAGAATCAGCTGAGGTATAGCGAGAGCATCAAGATCCTGAAAGAGATGAAGGAGATGTACGACCGCTAGCTGGGAATCCCCCAGGCAGTATCCCacagcagagggaggagaaaagaatAGAGCAGGTAGGAGCCACGAGCAAGTCATCTACCCCAGGACGCTGCACTAGTCCTCTCCCCAAGGAGGACATTACGTGTGACAATGTCAGAGGAGCCTCATGGAGGTCATTTCTACCATAAACTGCCACAATTAGGGACCCAAAGTTCTCGTTTTGAAAAAATGTAGCAATACTTTCAGTAAGTTGATGCTTCTGGTGGGCCCAAGTTCATCTGTTTAAATAATTATTACATGTTTTTTGTCATATTACAGAATATCTGGTAATGCATTATATAGTCTGTTGTCTGACACAACAATGTGTCATGAAAAGTTTGTAAACAGGTTGAGTAGTGTGCAACATTTGTCTAAATTCCGGAATACTCTAAATTAATTCCAGGCTTCCAGTggtaaatatttgtattttagGATCACCAGTTTCCCAGACAAGCAGTGCTCTTATGAATCTTTTTTTTGTTTAAACATTCAAAAGAAAAGTCTCTCACGCATCTAAAATTTTAagtaaactgt

Function

symbol description
lin37 Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be part of Myb complex. Orthologous to human LIN37 (lin-37 DREAM MuvB core complex component).

NR:

description
antolefinin isoform X1

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0017053 transcription repressor complex cellular_component

KEGG:

id description
K21774 LIN37; protein lin-37

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039678.1 False 1147 mRNA 0.47 11 14508406 14511632
XM_021581777.2 False 1701 mRNA 0.43 10 14508412 14511494
XM_021581762.2 False 1811 mRNA 0.43 10 14508412 14511632
XM_021581769.2 False 1805 mRNA 0.43 10 14508412 14511632
NM_001165044.1 True 1351 mRNA 0.46 10 14508794 14511520

Neighbor

gene id symbol gene type direction distance location
LOC110510742 LOC106578317 coding downstream 26751 14475682 ~ 14481655 (-)
LOC110510581 LOC106578340 coding downstream 111123 14389198 ~ 14397283 (-)
si:dkey-79d12.4 LOC106605603 coding downstream 229264 14270653 ~ 14279142 (-)
LOC110510806 LOC106578077 coding downstream 316100 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 406125 14099401 ~ 14102281 (-)
psenen LOC106577931 coding upstream 7565 14519197 ~ 14524902 (-)
LOC110503689 tm149 coding upstream 89270 14598789 ~ 14638314 (-)
LOC110510719 LOC106577908 coding upstream 128137 14639769 ~ 14642909 (-)
zbtb32 LOC106577891 coding upstream 144232 14655864 ~ 14667500 (-)
aplp1 LOC106577862 coding upstream 182974 14694606 ~ 14742899 (-)
G227094 NA non-coding downstream 9552 14496793 ~ 14498854 (-)
G227068 NA non-coding downstream 78961 14424463 ~ 14429445 (-)
G227065 LOC106577515 non-coding downstream 91528 14415060 ~ 14416878 (-)
G227015 NA non-coding downstream 98326 14409102 ~ 14410080 (-)
G227064 NA non-coding downstream 102256 14405901 ~ 14406150 (-)
G227162 LOC106577926 non-coding upstream 107307 14618939 ~ 14623213 (-)
G227163 NA non-coding upstream 108636 14620268 ~ 14625116 (-)
G227207 NA non-coding upstream 202641 14714273 ~ 14714833 (-)
G227331 NA non-coding upstream 382617 14894249 ~ 14894545 (-)
G227060 NA other downstream 33240 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 506598 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 580573 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 1164031 13344074 ~ 13344375 (-)
G226224 NA other downstream 1283891 13223884 ~ 13224515 (-)
LOC110512327 LOC106578554 other upstream 1024733 15536363 ~ 15539677 (-)
G228094 NA other upstream 1089383 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 1194602 15706234 ~ 15708265 (-)

Expression


Co-expression Network