Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944492 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 15932818 ~ 15935521 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039833.1 | False | 524 | mRNA | 0.46 | 4 | 15932818 | 15935444 |
| TU261822 | True | 203 | lncRNA | 0.35 | 1 | 15935319 | 15935521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503781 | LOC106605653 | coding | downstream | 20089 | 15900898 ~ 15912729 (-) |
| LOC110512120 | LOC106605647 | coding | downstream | 71249 | 15853231 ~ 15861569 (-) |
| LOC110503786 | telt | coding | downstream | 102792 | 15824078 ~ 15830026 (-) |
| LOC110503794 | LOC106578507 | coding | downstream | 115665 | 15801359 ~ 15817153 (-) |
| LOC118946067 | NA | coding | downstream | 247764 | 15683972 ~ 15685054 (-) |
| LOC118946082 | NA | coding | upstream | 29597 | 15965041 ~ 15965445 (-) |
| LOC110512031 | grik2 | coding | upstream | 251937 | 16187381 ~ 16421977 (-) |
| cep162 | cep162 | coding | upstream | 869558 | 16805002 ~ 16826110 (-) |
| LOC110503762 | LOC106605503 | coding | upstream | 1140069 | 17075513 ~ 17188347 (-) |
| LOC118946294 | NA | coding | upstream | 1167021 | 17102465 ~ 17105382 (-) |
| G228823 | NA | non-coding | downstream | 74026 | 15858361 ~ 15858792 (-) |
| G228822 | NA | non-coding | downstream | 79617 | 15852446 ~ 15853201 (-) |
| G228207 | NA | non-coding | downstream | 137067 | 15795513 ~ 15795751 (-) |
| G228191 | LOC106578455 | non-coding | downstream | 141417 | 15762029 ~ 15791401 (-) |
| G228189 | NA | non-coding | downstream | 171972 | 15760569 ~ 15760846 (-) |
| G228889 | NA | non-coding | upstream | 36114 | 15971558 ~ 15973267 (-) |
| G228933 | NA | non-coding | upstream | 105838 | 16041282 ~ 16044067 (-) |
| G228938 | NA | non-coding | upstream | 119954 | 16055398 ~ 16056008 (-) |
| G228994 | NA | non-coding | upstream | 216332 | 16151776 ~ 16152337 (-) |
| G229005 | NA | non-coding | upstream | 232558 | 16168002 ~ 16168219 (-) |
| G228098 | fbrl | other | downstream | 224553 | 15706234 ~ 15708265 (-) |
| G228094 | NA | other | downstream | 331330 | 15601015 ~ 15601488 (-) |
| LOC110512327 | LOC106578554 | other | downstream | 394503 | 15536363 ~ 15539677 (-) |
| LOC110503689 | tm149 | other | downstream | 1296108 | 14598789 ~ 14638314 (-) |
| G229373 | LOC100194703 | other | upstream | 903945 | 16839389 ~ 16839839 (-) |
| G229380 | LOC106605502 | other | upstream | 914528 | 16849972 ~ 16850199 (-) |
| G229707 | NA | other | upstream | 1109581 | 17043792 ~ 17048344 (-) |
| LOC110505118 | LOC106579600 | other | upstream | 2039801 | 17975160 ~ 17985544 (-) |
| LOC110503747 | lars2 | other | upstream | 2158312 | 18093704 ~ 18154474 (-) |
