XLOC_002164



Basic Information


Item Value
gene id XLOC_002164
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26564221 ~ 26564521 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005714
ggatgataaccgttttcaaggtataccgcggtttggaaaagtcaaggtttaaaagCACCAAAGCTTTCAGCTATACCGTTTCTACGGTATatgtacaattttttattaaGACAACAGCATCTCTAGCAGAAAAGGTATCCAAAGATGCTgctttaaattaagaattttagatactaatgaagacagcagacgccaatgatttattttaatgaattaatctgacatgtttactactccaaaatattttaaatgtttctcgaaataaaatatattgtgttcaaaagggaaaaagtagttgttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005714 True 301 lncRNA 0.31 1 26564221 26564521

Neighbor


gene id symbol gene type direction distance location
XLOC_002162 BX530069.2 coding upstream 257878 26306229 ~ 26306343 (+)
XLOC_002161 NA coding upstream 291073 26269060 ~ 26273148 (+)
XLOC_002160 trim47 coding upstream 436042 26118122 ~ 26128179 (+)
XLOC_002159 frem2a coding upstream 447585 25982212 ~ 26116636 (+)
XLOC_002158 BX530083.1 coding upstream 599822 25964284 ~ 25964399 (+)
XLOC_002165 slc9a6b coding downstream 6653 26571174 ~ 26597800 (+)
XLOC_002166 fhl1b coding downstream 33469 26597990 ~ 26621189 (+)
XLOC_002167 NA coding downstream 64272 26628793 ~ 26629282 (+)
XLOC_002168 adgrg4b coding downstream 69951 26634472 ~ 26637493 (+)
XLOC_002169 adgrg4b coding downstream 81432 26645953 ~ 26652593 (+)
XLOC_002156 NA non-coding upstream 798650 25762203 ~ 25765571 (+)
XLOC_002154 NA non-coding upstream 861814 25687634 ~ 25702407 (+)
XLOC_002174 CR545465.1 non-coding downstream 201864 26766385 ~ 26771677 (+)
XLOC_002175 NA non-coding downstream 221848 26786369 ~ 26786785 (+)
XLOC_002181 NA non-coding downstream 318181 26882702 ~ 26883139 (+)
XLOC_002190 NA non-coding downstream 497240 27061761 ~ 27064405 (+)

Expression



Co-expression Network