dhrs12 (LOC106586499)


Basic Information

Item Value
gene id dhrs12
gene name LOC106586499
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62543577 ~ 62547782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597612.2
GAAACGTAAAAAGAGGCGTGTTTTGTCTAGTGTTATGCAAAGTTAAAGTAGCTATATAACTCCACTTAAAAATAATtatccagctaactagctagctacctaaagaTGTCGTTTTACAGAAACGCCGTTTGGTTCGTTAAAGGACTTCAAGAATACACAAAAAGCGGATATGAAGCAGCAGCTAAGCAGTTTAATACTGGGGACCTGGACGTGAACCTGAGTGGCAGGTCTTTTGTAATCACTGGGGCCAACAGCGGCATTGGAAAAGCTACAGCCCATGAAATAGCCAAAAGAGGAGGGATTGTCCACCTGGTGTGTCGTAACAAGGAGCGGGCACAGGAGGCGAAGGAGGAGCTGGTGGAACATACTAAAAACCAGAATGTCCATGTTCACATCGTTGACATGTCCAGTGCAAGACAAGTGTGGGAGTTTGCAGAGAGCTTCTCAAAAAGCAACAGCATTCATGTACTGATCAACAATGCAGGGTGTATGGTAAACCAGAAAGAGCTGACAGAGGAAGGTGTAGAGAAGAACTTTGCTACTAACACTCTCGGTACCTTCATCCTAACCACAGCGTTGATACCAGCCCTGAAACAGGCACAGGACCCACGAGTGATCACAGTGTCTTCAGGGGGCATGCTGGTCCAGAAGATGAAAGTAGATGACCTGCAGTCTGAGAAGGGAACGTTCGACGGCACTATGGCCTACGCTCAGAATAAAAGACAACAGGTGATACTGACCGAGAGATGGGCGTCCCAGCATAAAGAGATCCATTTCTCATCAATGCACCCTGGCTGGGCTGATACTCCAGCTGTCCAGTTGTCCATGCCTGACTTCCATGCTAAGATGAAGAACAAGCTGCGTACGGAGTCCATGGGGGCCGACACGGTGGTGTGGCTGGCTGTCTCAGCAGTGGCCTCCAACCAGCCCAGTGGACTCTTCTTCCAGGACCGAATGGCGGTGCCCACACACCTTCCGCTGGCTTTAACCAGGTCCTCTCCGGCCGATGAGGAGAAGCTGCAGGCAATATTGGAGCAGCTCGCACACAAGTTCAAACCTTGACTTCTCCTACAGCGGTCAAAAGGTTATGAACAGACAGACCCTCAAGCCCGTGTGTCCGTTGACAAACACTCCTCATTATAGATATGCACTGTATAAAGCGGACATAGCGGTAATATTTTTACAACCATTTTCTATTTATGGTGATGATCTGTAACTTGATTGCTTGCTATTGCTAAGATCCAAGTGTAGCCACACAGAGCATTTCAGTGGCTCATGTTTGGGGTAGAGGCCTTCACTGGTCATTCTGAAATGGACCTGGGGTTTTCCCATCCAGACCTGAAATGCATACATttgtaacaaaaaaaaatatatatatatatatagatagatagatagaagccCGTTCAGTACAACTAGACCCGTTCTGTATAGACCTGGTCCGATCCAGACCCGGTCCGATCCGAGTAAGACAAGCAGCAGAAAGGTCCATTtttaagctactttattaactgGAGCTGATAaaaaggggaggtagagagaggtgacgCTCTAGCAGGGGCCGTGCTGTGTGtgtagtctgctgtgagtgtgagCGAGTGacgtggggaggagggagagagaaaccccAACCAACCAAGCCGACTCGCGCTGTAGTAGAATAATAGCTGCCATTgctaggttatttatcatccaATATGATTACGTAGTACCTGTCTTGACTGCACCAAACCGGGAGAAGATAGCTAGACTAATTGAGGCTGCATGCACTTTCTCGTTCTACACATTTACAAACAACAATGCCTCCagtccacaggaggttggtggcaccttatttggggagaacaggctcgtggtaatgactggagtggaatggtatcaaacacatgcagcgacggttctagcttgtatggcttcCTAGGCATTTTATTAACATACCACTGTACACACTCTAGTGTAGAATGTCCAGTGCATTAAAGACAGTTAATCAACTTCAAGTAAATAATAAAAGGCACCAATAAATATTTCAATCTTATATTTTCA

Function

NR:

description
dehydrogenase/reductase SDR family member 12-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K11168 DHRS12; dehydrogenase/reductase SDR family member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597612.2 True 2043 mRNA 0.46 10 62543577 62547782

Neighbor

gene id symbol gene type direction distance location
rubcnl rubcnl coding upstream 1546 62534646 ~ 62542031 (+)
LOC110520349 lrch1 coding upstream 117277 62423414 ~ 62430935 (+)
LOC110520346 htr2a coding upstream 137181 62367489 ~ 62408857 (+)
LOC110520345 NA coding upstream 256759 62281719 ~ 62286818 (+)
LOC110520344 sucla2 coding upstream 270748 62254960 ~ 62272829 (+)
LOC110504388 LOC106586502 coding downstream 50895 62598677 ~ 62612475 (+)
LOC110520352 LOC106586504 coding downstream 75137 62622919 ~ 62648515 (+)
LOC118964306 LOC106586506 coding downstream 151105 62698887 ~ 62701213 (+)
LOC110504398 LOC106586506 coding downstream 157669 62705451 ~ 62712740 (+)
LOC110520355 LOC105016359 coding downstream 235464 62770924 ~ 62815230 (+)
G283779 NA non-coding upstream 25155 62516801 ~ 62518422 (+)
G282976 NA non-coding upstream 134136 62409223 ~ 62409441 (+)
G282907 NA non-coding upstream 223184 62303483 ~ 62320393 (+)
G282822 NA non-coding upstream 371685 62169746 ~ 62171892 (+)
G283802 LOC106613263 non-coding downstream 28701 62576483 ~ 62577684 (+)
G283800 NA non-coding downstream 30673 62578455 ~ 62579127 (+)
G283817 NA non-coding downstream 101705 62649487 ~ 62650344 (+)
G283833 NA non-coding downstream 107148 62654930 ~ 62655154 (+)
LOC110520339 lrrc63 other upstream 346626 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 582102 61957388 ~ 61964066 (+)
G281996 NA other upstream 1506472 61033766 ~ 61037105 (+)
G281714 NA other upstream 1649799 60891524 ~ 60893778 (+)
G284313 NA other downstream 468544 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 578108 63124380 ~ 63129015 (+)
G284537 NA other downstream 719337 63267119 ~ 63312394 (+)
G284599 NA other downstream 843149 63390931 ~ 63391284 (+)

Expression


Co-expression Network