XLOC_002174 (CR545465.1)


Basic Information

Item Value
gene id XLOC_002174
gene name CR545465.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26766385 ~ 26771677 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004188
aaaacacaacaacaacaacaacaaccatcaAACGTCGTCGAAAACCGGATATTCTGGAACAGGACTGCAGTCAACAGTGAAAGTGGCAAATAAATCCAATGGAGATATTGTAAAAAGGAAACGTGGGTTACAGTGAGGATCACCTGTCAGCCAGTGGTGGAGATAAAGGCTGCTCTCTGTCTGGCTGAGAATCTCCTGAGAAACACAAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094211

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004188 True 210 lncRNA 0.44 2 26766385 26771677

Neighbor

gene id symbol gene type direction distance location
XLOC_002173 f9b coding upstream 8899 26747755 ~ 26757486 (+)
XLOC_002172 tmtops3b coding upstream 73738 26689262 ~ 26692647 (+)
XLOC_002171 si:ch73-52f15.5 coding upstream 88399 26667475 ~ 26677986 (+)
XLOC_002170 htatsf1 coding upstream 99142 26652859 ~ 26667243 (+)
XLOC_002169 adgrg4b coding upstream 113792 26645953 ~ 26652593 (+)
XLOC_002175 NA coding downstream 14692 26786369 ~ 26786785 (+)
XLOC_002176 arr3a coding downstream 28536 26800213 ~ 26811397 (+)
XLOC_002177 si:ch211-263p13.7 coding downstream 42033 26813710 ~ 26822190 (+)
XLOC_002178 znrd2 coding downstream 55436 26827113 ~ 26832044 (+)
XLOC_002179 fam89b coding downstream 63308 26834985 ~ 26837173 (+)
XLOC_002167 NA non-coding upstream 137103 26628793 ~ 26629282 (+)
XLOC_002164 NA non-coding upstream 201864 26564221 ~ 26564521 (+)
XLOC_002162 BX530069.2 non-coding upstream 460042 26306229 ~ 26306343 (+)
XLOC_002161 NA non-coding upstream 493237 26269060 ~ 26273148 (+)
XLOC_002158 BX530083.1 non-coding upstream 801986 25964284 ~ 25964399 (+)
XLOC_002181 NA non-coding downstream 111025 26882702 ~ 26883139 (+)
XLOC_002190 NA non-coding downstream 290084 27061761 ~ 27064405 (+)
XLOC_002193 NA non-coding downstream 397449 27169126 ~ 27198982 (+)
XLOC_002195 NA non-coding downstream 1432087 28203764 ~ 28246420 (+)

Expression


Co-expression Network