XLOC_002175


Basic Information

Item Value
gene id XLOC_002175
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26786369 ~ 26786785 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005716
CAGGCCAAAACTCACTTTACCTGCATATCAGCAGTGAGCAAGAGGTGGAGCGGCAGACTAAAATTACAGCGGGGTGTGTGCAAATATTGCAGAAAGACGTTTACTTACACTAACAGAACAATGAATATGATGCAGCACAGTGAAAAAACAGGTATTAGATTGTTCCTTCTTTaccttatttttttcagtttagtttatgaatattttaagaATTTGCTTATTATaccatatataattttttataatcagtATTTGATGGCAGTGGCCAGTCCCCTGAAGCAGAAGGGGctattgaccacctctgtacacactgctctctggtttaggaaaaGATTTCTCCCTACACCAGCCACCTCAGTCACCAGTGAAAGAGTTTTTTCATCAGCAGagaacattgtaaatgtgcacagatctcag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005716 True 417 lncRNA 0.39 1 26786369 26786785

Neighbor

gene id symbol gene type direction distance location
XLOC_002174 CR545465.1 coding upstream 14692 26766385 ~ 26771677 (+)
XLOC_002173 f9b coding upstream 28883 26747755 ~ 26757486 (+)
XLOC_002172 tmtops3b coding upstream 93722 26689262 ~ 26692647 (+)
XLOC_002171 si:ch73-52f15.5 coding upstream 108383 26667475 ~ 26677986 (+)
XLOC_002170 htatsf1 coding upstream 119126 26652859 ~ 26667243 (+)
XLOC_002176 arr3a coding downstream 13428 26800213 ~ 26811397 (+)
XLOC_002177 si:ch211-263p13.7 coding downstream 26925 26813710 ~ 26822190 (+)
XLOC_002178 znrd2 coding downstream 40328 26827113 ~ 26832044 (+)
XLOC_002179 fam89b coding downstream 48200 26834985 ~ 26837173 (+)
XLOC_002180 ehbp1l1b coding downstream 84701 26871486 ~ 26925511 (+)
XLOC_002167 NA non-coding upstream 157087 26628793 ~ 26629282 (+)
XLOC_002164 NA non-coding upstream 221848 26564221 ~ 26564521 (+)
XLOC_002162 BX530069.2 non-coding upstream 480026 26306229 ~ 26306343 (+)
XLOC_002161 NA non-coding upstream 513221 26269060 ~ 26273148 (+)
XLOC_002181 NA non-coding downstream 95917 26882702 ~ 26883139 (+)
XLOC_002190 NA non-coding downstream 274976 27061761 ~ 27064405 (+)
XLOC_002193 NA non-coding downstream 382341 27169126 ~ 27198982 (+)
XLOC_002195 NA non-coding downstream 1416979 28203764 ~ 28246420 (+)
XLOC_002196 CU207388.1 non-coding downstream 1465893 28252678 ~ 28252795 (+)

Expression


Co-expression Network