XLOC_002181


Basic Information

Item Value
gene id XLOC_002181
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26882702 ~ 26883139 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005717
aaaatgtacaaaatcatATGCATTAGTAAACCTAATAGGATTAAAGTAatgctttctatttattttatatataatttaaaatttagGAAATAACCCATGACAATTATTTTTACTatcggcccacagccctcaaatTATATTTGGCATTTGGCCTTTTATAAAAAACAGTTTGGTCACCCATTTGTTTGAagagtaaatgacagaaatacactaaacaaatgtaaataatatacatcaaagttttcaataaaatatacaaGTATTAAGgtaatattaaaccacactaaacataaatatgttaatgaaataaataaataaacatttattttaatgctgAAAACATCAATCAAAGAAGAGTCAATTAAAACAAGACACGTTTTAATACACTGGAaagcccaaaaagttaaggtaactcaaaccatttgaggaaaccgattg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005717 True 438 lncRNA 0.26 1 26882702 26883139

Neighbor

gene id symbol gene type direction distance location
XLOC_002179 fam89b coding upstream 45529 26834985 ~ 26837173 (+)
XLOC_002178 znrd2 coding upstream 50658 26827113 ~ 26832044 (+)
XLOC_002177 si:ch211-263p13.7 coding upstream 60512 26813710 ~ 26822190 (+)
XLOC_002176 arr3a coding upstream 71305 26800213 ~ 26811397 (+)
XLOC_002175 NA coding upstream 95917 26786369 ~ 26786785 (+)
XLOC_002182 rab1bb coding downstream 43515 26926654 ~ 26933708 (+)
XLOC_002183 CR450793.1 coding downstream 52016 26935155 ~ 26941550 (+)
XLOC_002184 frmd8 coding downstream 61279 26944418 ~ 26961209 (+)
XLOC_002185 vps51 coding downstream 78826 26961965 ~ 26972430 (+)
XLOC_002186 tm7sf2 coding downstream 89616 26972755 ~ 26978376 (+)
XLOC_002174 CR545465.1 non-coding upstream 111025 26766385 ~ 26771677 (+)
XLOC_002167 NA non-coding upstream 253420 26628793 ~ 26629282 (+)
XLOC_002164 NA non-coding upstream 318181 26564221 ~ 26564521 (+)
XLOC_002162 BX530069.2 non-coding upstream 576359 26306229 ~ 26306343 (+)
XLOC_002190 NA non-coding downstream 178622 27061761 ~ 27064405 (+)
XLOC_002193 NA non-coding downstream 285987 27169126 ~ 27198982 (+)
XLOC_002195 NA non-coding downstream 1320625 28203764 ~ 28246420 (+)
XLOC_002196 CU207388.1 non-coding downstream 1369539 28252678 ~ 28252795 (+)
XLOC_002199 NA non-coding downstream 1559770 28442909 ~ 28455085 (+)

Expression


Co-expression Network