G227094


Basic Information

Item Value
gene id G227094
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14496793 ~ 14498854 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259761
ttaaataaaaacacaacAAATGCTTATCAGAATCCAGCTTTATTGGTTGTGATATATTCAATCTGATAAAAGTGAAGGTTGTGTGAACTGCACAACAGCACAAGGCTGTAGGAGCCTGCCGTAGACATAAATATTACACAGGATGTTCTCAAGAGGGGAAGTGATGACACAGGCCAGATCTGCAGTAGGTGTGAAGGGAGCTGAGATGTGGACAGGATGTGGATTCTCTCCTGTAGAGGTCAGGGATTTTTGTCGACCTCCTTGATGTTTGGGCCAGAGGAGGAGCCAGCTCCAGCACCTCCAGGGAAGCCTCCTGGCATACCTCCTGGCGGGCCTCCGGCACCCTGATACAGATTGGTGGGGTTACTTACACACCTTCTCCAGCTCCTTCTGCTGGTGCTCATACTCATCCTTCTCTGCTGTCACAAAGAACACGTCCTCCGGGCTGATCTTTTCCGTGAGCTTCTTGTCGTCCACTGTGCTCTTCATGTTGAAAGCCAGGGACTCCAGCGAGTTCTTAGCTGTGACGTTCTCCTTCTGTGCCTCGTCCTCAGCCCTGTACTGGTCAGCCTCTTGCACCATGCTCTCAATGTCCTCCTTGGTCAGACGTCCTTTGTCATTGGTGATGGTGATCTTGTTCTTCTTGCCGGTGCTCTTGTCCACCGCAGACACATTGAGGAGGCCATTGGCGTCAAAGTCAAAGTTCACCTCGATCTGGGCGCAGGGGGGATTCCAGTGGGCTCAAACTTGCAGAGGATATTGTTGTCCTTGGTCATGGCTCTCTCCCCCTAATTCACCTGGATGAGCACTCCGGGTTGGTTTTCTGAGTATGTTGTGAAGGTCTGAGTCTGCATGATGGGGATGGTGGTGTTCCTCTTGATGAGCACAGTCATGACCCCTCCCGCCATCTCAATACCAAGCATCTTAAGTCCAGCAGCAGCAGGTCCTGCACGTTCTCTGACTTGTCACCGGCCAAGATGGCAGTCTGCACAGAGGCGCCATAAGCCAGAGCCTCATCAGGGATGATGCTCTTGTTGAGGTCTCGCCCATTTGAATAAGTCCTGCAGAAGCTTCTAGATCTTGGGGATACGTGTCGAGCCTCCCACCAGGACGATGTCGTGTATCTGGGCCTTGTCCATCTTGGCATCTCTCATAGACTTCTCCATGGGTTCCAGGGTGCTGCGGAACAGGTCAACGTTGAGCTCCTCAAAGCGAGCCCcgtaatggaggtgtagatgtcGGCACCTTCATAGAGAGAGTCAATCTTGATGCTGGCCTGGGTACTGGAGGACAGGGTGCGCTTGGCCCGCTCACAGGCAGTGCGCAGGCGCCGCACCACCTCTTGTTGCCGCTGATGTCCTTCTTGAATTTACGCTTGAACTCGCTGATGAAGTGATTGACCATGCGGCCTCCCAGGTGGGTGTCGCCAGCGGTGGACTTGACCTCAAAGATGCCATCCTCGATGGTCAGGATGGACACGTCTAAGGTGCCGCCACCCAGGTCGAAGAACAGGACTCTTGCGCTCACCGCCG

Function

NR:

description
heat shock cognate 70 kDa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259761 True 1532 lncRNA 0.45 5 14496793 14498854

Neighbor

gene id symbol gene type direction distance location
LOC110510742 LOC106578317 coding downstream 15138 14475682 ~ 14481655 (-)
LOC110510581 LOC106578340 coding downstream 99510 14389198 ~ 14397283 (-)
si:dkey-79d12.4 LOC106605603 coding downstream 217651 14270653 ~ 14279142 (-)
LOC110510806 LOC106578077 coding downstream 304487 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 394512 14099401 ~ 14102281 (-)
antol lin37 coding upstream 9552 14508406 ~ 14511632 (-)
psenen LOC106577931 coding upstream 20343 14519197 ~ 14524902 (-)
LOC110503689 tm149 coding upstream 102048 14598789 ~ 14638314 (-)
LOC110510719 LOC106577908 coding upstream 140915 14639769 ~ 14642909 (-)
zbtb32 LOC106577891 coding upstream 157010 14655864 ~ 14667500 (-)
G227068 NA non-coding downstream 67348 14424463 ~ 14429445 (-)
G227065 LOC106577515 non-coding downstream 79915 14415060 ~ 14416878 (-)
G227015 NA non-coding downstream 86713 14409102 ~ 14410080 (-)
G227064 NA non-coding downstream 90643 14405901 ~ 14406150 (-)
G227008 NA non-coding downstream 112882 14377464 ~ 14383911 (-)
G227162 LOC106577926 non-coding upstream 120085 14618939 ~ 14623213 (-)
G227163 NA non-coding upstream 121414 14620268 ~ 14625116 (-)
G227207 NA non-coding upstream 215419 14714273 ~ 14714833 (-)
G227331 NA non-coding upstream 395395 14894249 ~ 14894545 (-)
G227060 NA other downstream 21627 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 494985 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 568960 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 1152418 13344074 ~ 13344375 (-)
G226224 NA other downstream 1272278 13223884 ~ 13224515 (-)
LOC110512327 LOC106578554 other upstream 1037511 15536363 ~ 15539677 (-)
G228094 NA other upstream 1102161 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 1207380 15706234 ~ 15708265 (-)

Expression


Co-expression Network