Gene
RNA
| Item | Value |
|---|---|
| gene id | G227162 |
| gene name | LOC106577926 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 14618939 ~ 14623213 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| histone-lysine N-methyltransferase 2A-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU259851 | True | 323 | lncRNA | 0.51 | 2 | 14618939 | 14623213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503689 | tm149 | coding | downstream | 11171 | 14598789 ~ 14638314 (-) |
| psenen | LOC106577931 | coding | downstream | 94037 | 14519197 ~ 14524902 (-) |
| antol | lin37 | coding | downstream | 107307 | 14508406 ~ 14511632 (-) |
| LOC110510742 | LOC106578317 | coding | downstream | 137284 | 14475682 ~ 14481655 (-) |
| LOC110510581 | LOC106578340 | coding | downstream | 221656 | 14389198 ~ 14397283 (-) |
| LOC110510719 | LOC106577908 | coding | upstream | 16556 | 14639769 ~ 14642909 (-) |
| zbtb32 | LOC106577891 | coding | upstream | 32651 | 14655864 ~ 14667500 (-) |
| aplp1 | LOC106577862 | coding | upstream | 71393 | 14694606 ~ 14742899 (-) |
| LOC110510856 | LOC106577793 | coding | upstream | 156854 | 14780067 ~ 14834031 (-) |
| si:dkey-262k9.2 | LOC106577773 | coding | upstream | 400312 | 15023525 ~ 15040893 (-) |
| G227094 | NA | non-coding | downstream | 120085 | 14496793 ~ 14498854 (-) |
| G227068 | NA | non-coding | downstream | 189494 | 14424463 ~ 14429445 (-) |
| G227065 | LOC106577515 | non-coding | downstream | 202061 | 14415060 ~ 14416878 (-) |
| G227015 | NA | non-coding | downstream | 208859 | 14409102 ~ 14410080 (-) |
| G227064 | NA | non-coding | downstream | 212789 | 14405901 ~ 14406150 (-) |
| G227207 | NA | non-coding | upstream | 91060 | 14714273 ~ 14714833 (-) |
| G227331 | NA | non-coding | upstream | 271036 | 14894249 ~ 14894545 (-) |
| G227340 | NA | non-coding | upstream | 276621 | 14899834 ~ 14900139 (-) |
| G227472 | LOC106605624 | non-coding | upstream | 367250 | 14990463 ~ 14991406 (-) |
| G227476 | NA | non-coding | upstream | 374004 | 14997217 ~ 14998401 (-) |
| G227060 | NA | other | downstream | 143773 | 14428793 ~ 14475166 (-) |
| LOC110538195 | LOC106578103 | other | downstream | 617131 | 13995196 ~ 14023153 (-) |
| wu:fe05a04 | LOC106578221 | other | downstream | 691106 | 13909746 ~ 13927861 (-) |
| G226294 | LOC100136012 | other | downstream | 1274564 | 13344074 ~ 13344375 (-) |
| LOC110512327 | LOC106578554 | other | upstream | 913152 | 15536363 ~ 15539677 (-) |
| G228094 | NA | other | upstream | 977802 | 15601015 ~ 15601488 (-) |
| G228098 | fbrl | other | upstream | 1083021 | 15706234 ~ 15708265 (-) |
| G228191 | LOC106578455 | other | upstream | 1164409 | 15762029 ~ 15791401 (-) |
| G229373 | LOC100194703 | other | upstream | 2216176 | 16839389 ~ 16839839 (-) |
