G227207


Basic Information

Item Value
gene id G227207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14714273 ~ 14714833 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259902
CAGTTTCTATGTCCACTTACTGTAAATAGGAGGTTGagtcatgtacagtaccagtagtCAAAAGGACTTGAATGAATAAAGTCATTATAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCACTACAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCCCATACAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCCCATACAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCACTACAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCATTATAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCATTATAGTACCAGTAGTCATAAAGACTTGAATGAATGAAGTCATTATAGTACCAGTAGTCATAAAGACTTGAATGAATAAAGTCCCATACAGTACCAGTTGTCATAAAGACTTGAATGAATAAAGTCCCTTACAGTACCAGTAGTCATAGAGACTTGAATGAATAAAGTCATTATAGTACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259902 True 519 lncRNA 0.35 2 14714273 14714833

Neighbor

gene id symbol gene type direction distance location
zbtb32 LOC106577891 coding downstream 46773 14655864 ~ 14667500 (-)
LOC110510719 LOC106577908 coding downstream 71364 14639769 ~ 14642909 (-)
LOC110503689 tm149 coding downstream 106505 14598789 ~ 14638314 (-)
psenen LOC106577931 coding downstream 189371 14519197 ~ 14524902 (-)
antol lin37 coding downstream 202641 14508406 ~ 14511632 (-)
LOC110510856 LOC106577793 coding upstream 65234 14780067 ~ 14834031 (-)
si:dkey-262k9.2 LOC106577773 coding upstream 308692 15023525 ~ 15040893 (-)
LOC118936618 LOC106605662 coding upstream 387520 15102353 ~ 15109931 (-)
LOC110511165 NA coding upstream 398002 15112835 ~ 15115841 (-)
plm plm coding upstream 443759 15158002 ~ 15171917 (-)
G227163 NA non-coding downstream 89157 14620268 ~ 14625116 (-)
G227162 LOC106577926 non-coding downstream 91060 14618939 ~ 14623213 (-)
G227094 NA non-coding downstream 215419 14496793 ~ 14498854 (-)
G227068 NA non-coding downstream 284828 14424463 ~ 14429445 (-)
G227331 NA non-coding upstream 179416 14894249 ~ 14894545 (-)
G227340 NA non-coding upstream 185001 14899834 ~ 14900139 (-)
G227472 LOC106605624 non-coding upstream 275630 14990463 ~ 14991406 (-)
G227476 NA non-coding upstream 282384 14997217 ~ 14998401 (-)
G227438 fxyd5a non-coding upstream 289454 15004287 ~ 15022575 (-)
G227060 NA other downstream 239107 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 712465 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 786440 13909746 ~ 13927861 (-)
LOC110512327 LOC106578554 other upstream 821532 15536363 ~ 15539677 (-)
G228094 NA other upstream 886182 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 991401 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 1072789 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 2124556 16839389 ~ 16839839 (-)

Expression


Co-expression Network