Gene
RNA
| Item | Value |
|---|---|
| gene id | G259600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 42233442 ~ 42233681 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU295501 | True | 240 | lncRNA | 0.48 | 1 | 42233442 | 42233681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519968 | LOC106586018 | coding | downstream | 1828407 | 40396378 ~ 40405035 (-) |
| LOC118944520 | NA | coding | downstream | 1950566 | 40279614 ~ 40282876 (-) |
| LOC110519967 | shox | coding | downstream | 2108179 | 40111206 ~ 40125263 (-) |
| LOC110519961 | NA | coding | downstream | 2572863 | 39646055 ~ 39660579 (-) |
| LOC110519957 | LOC106586009 | coding | downstream | 2590147 | 39631499 ~ 39643295 (-) |
| LOC110519979 | LOC106586061 | coding | upstream | 9895 | 42243576 ~ 42291605 (-) |
| col6a3 | LOC106598405 | coding | upstream | 58047 | 42291728 ~ 42329627 (-) |
| LOC110519978 | LOC106586070 | coding | upstream | 95958 | 42329639 ~ 42334795 (-) |
| LOC118936375 | LOC106581667 | coding | upstream | 101226 | 42334907 ~ 42339654 (-) |
| LOC110519982 | LOC106586070 | coding | upstream | 106229 | 42339910 ~ 42364268 (-) |
| G259595 | NA | non-coding | downstream | 5651 | 42227552 ~ 42227791 (-) |
| G259563 | LOC100194537 | non-coding | downstream | 35305 | 42196726 ~ 42198137 (-) |
| G259539 | NA | non-coding | downstream | 71275 | 42140069 ~ 42162167 (-) |
| G259496 | NA | non-coding | downstream | 110130 | 42089844 ~ 42123312 (-) |
| G259344 | NA | non-coding | downstream | 315137 | 41905291 ~ 41918305 (-) |
| G259614 | NA | non-coding | upstream | 35549 | 42269230 ~ 42270124 (-) |
| G259579 | LOC106586070 | non-coding | upstream | 56578 | 42290259 ~ 42319385 (-) |
| G259576 | LOC106599288 | non-coding | upstream | 57682 | 42285630 ~ 42327995 (-) |
| G259259 | sdpr | other | downstream | 465854 | 41763817 ~ 41767588 (-) |
| G256632 | NA | other | downstream | 1898002 | 40335210 ~ 40335440 (-) |
| G256616 | NA | other | downstream | 1910544 | 40322506 ~ 40322898 (-) |
| G256016 | LOC106581772 | other | downstream | 2414462 | 39818648 ~ 39818980 (-) |
| G255911 | NA | other | downstream | 2587699 | 39644571 ~ 39645743 (-) |
| G261580 | NA | other | upstream | 1755843 | 43989524 ~ 44031505 (-) |
| G262993 | NA | other | upstream | 2776491 | 45010172 ~ 45012249 (-) |
