G259779


Basic Information

Item Value
gene id G259779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 42586284 ~ 42590360 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU295683
TTTCTTCTCACAACTTTATTTAAACAGCAATAATGCTAACAATTGCACAAATCTGTTATAATaacattagatttaaaaaaaattacaatataAAAGAAACACCAAAGCAATCTCTTTTTTTTGTTGCGACAATGCTAAAACCTGAGAATTGAGTATGCCGGTCCTTGTCACTTGACCTATAACCTAACTGTAGAAACAGACTCCAAACATTCACTCAGGCAAGGTCTTTTTGGGTCCAATTTAATTTTTGGAACATTTCTTGTTCAGCAAAGGTCAGCAAGAGACCATCTTCACACAACGAGGACCAGTTCGAGATAGGAGGTTATAGGTTGAAAGTCACCTGGGACAGAAACAGCAAGAGACCGCATCAGTAACATGACTATCAGTGTGTAACGACAGTTTGGTAACACTTAACTGGATGTTCACTTCCCTATAGTCAACAGAACATCAAAGAGCAAGTGGAGACCCAAACAAACTTTTAGCATTCATCTGGACTTTGCAGCTGCCGAACTAAATCCACCACTCTAGTTGAATATGTATGATGGGACATTTACATGCAAGTATTTTGTCCTTGGGTGTGAATCAAAGAagtagtgtggggggtggggggggggggggtcgctgtGGAGTTGAAGTCTGTCTTAGCATCCTAGTTGCAACAGTAAAGCTACAACAGCACAAAGCAACAGCAATTCACTTCATTGGACACACAATATGTACAATTTGGAGACACTTTCCTTAAAATCATCAGCTATATCCTTGGTATAATCATTCGTCATTCCACAAGCAGCCACCATCTACACCGTTACTCTTAACGTGATCATATACATTTTCAGGCAATCATAACGTGAATTATGTCTGCTTTTAATAACAAACAACTGTTATGACCACTTACAGTTGCAATAACagattttaatttaaaaaaattatgacTGCTAACATTACAATCATAACAGCTATGAATGCAAACAGGCATTTCGGGGTTCAAGGAACAGTATTCCATACAAtgattgttatttatttaacttgtGTAGTGCTTTTCATTACATAAAAATAATCTCAAAGAGCCTAAAAAGCTAAACAAACATATTTAAATTGAGATATGCTTGTGGCGACAGCTTCACTCTGGTTGGTTACGTTAGAACATGAGTAGTTGCCGAGGTGTCAATCTCACTTCAGAAATCACGGGCACCGGTCACAGTGAACACCAATAaaaaaggagaagaaaaaaaatctaccaTATTCATAGAAAACATATGCCCATTTATACTAGTTTTACCACAAAGTTTCATCTATATAAATCTGGTCACAATTCACATTTGGAGTGAGGCAGAGTATGTACGTTTCAAAGCACTAAAAACTGCACCACATTGACATACTATAGTTTAGTACACACAAAGCACCCGCACTAAAGGCCTTACATACttatgcacacacatacaaacaaacaggtacattcacagtgcaggtgaCACGGGGGAGAGGGGGGGTGTTGTCGGGGAGAGTGTGTAGTATATGCGTGTGTGTTCGTGCTGGAGTGAGTTTGGTCTCTTTAAATTGAAGCTAGCTAGGATGGACAAAGGTGTTCAATTCCTAGCCTGTCTTGTTGAGCTTGAAAAGTCGTAACACTGTACAAGAACCAAGTTGCCTTTACCTTGACATAACACCGTTGAGGCTTTGTCAAGTCATTTAACATACACCAACATAACCTGTTCCATTCCATGTAACTATTCTGTATTTGAAATCTGTTCTGTCTTGCAAATTAAAGTGTTAAGACAGCTACAAACAAGAGTTATGCTCACTACTGTTGAACTCAGATGACCAGATTAGTCACTTGTCAGAGATGCTGGTCTATGTCACAATCGTATGCCCTATACTAGGGAAGTGTCTTGATtgacaggcagagaggagagtgaatgcGTGGAGGGGGAGGGGCAAATCGGCAGAAAGGCACTAGCTGCTTTGTCCAAGGGATGCCAACAGAGTTGGGGTCAAGGGGTGCTGGTGAGCATCAAAAgtacacgtacaaacacacagacactattGGTTAATTCTTACAAAACAATTGTCAAAAAACACCACTAACACAATCCACTGTGTTGTACATTGGAGTGGAGCTATGGCTGATAGGGTTTTACGCAAACACACCCACCTTGAATTAGCAAACAGTAGAGGGTGAAACAGTCTAAAAGGCACCATCTCTGGTGCCTCCATGTATCGGTGGCAATAGGGCTCCTTCATCTGATCCTGAAGATCTACAACCCTGTGCTTTCATTACGACAATGAGGGTAATACACGTGTCTGCCTTGTGGAGACCAAGCCGATGTCAGTTTGTGAACTGTATTTCAATGCAGGAGCTATGTGTCTTTAGAAAGTCCAGTTTGGAAAAATGTGAGGTAACTGATTAAGGCAAATGGAAATACCAAGTGCTGATGTTTTCCAAGTAAGTAACGACTCTTCTAGTAAATAATAGGGGCCATGGCCTCTTAAcgacatcaataaaataaaaaaaagccaaAGATCCCTTTAAAGCTAGCTCTTCAAGCAGAGGACATTTTGTTAAATCAGAAATAGACAGTAGCTTGTAACAGAATAGCAGAGTCGCATGATAGGCCTGTTTGCAAGGTAATATCAGATCTAATATACTCTAGTATGGATAACATCAACCTGGACTCCGACGATAGCAACGCAAGATAGCAGTTGAAGAAGGTTTGAGGGTGTGGTAAGAGTTTAAGAAAACCTTTCAAATCTTTACACTGTCAAAAGCATGACGGAACATGTCCGGTGTAGTTACAATAGCTAGCCAAGCAAGCGAGTTAGCCACGGTCATCTTGCATACAGTAACAGCTAGCTGCATGACATCATTGTAACTAAGGTTGCAAAGGGAGGGAATGTTACTGGTAACTTTCAAAATtgaccagtaaactaccagactTTTGAAAAGTTTAAGGTTTTTAATAAATTTTCATagcatgtaaaatatatttttttaattgtataAATGGTAAATTACAGGTAGTTTTGCAACCCTAATTGCAACACTTGACTGCTTATGACATCTTACTAATGACAGAGTAAAGGTAGCTAGCTTCATGAGTGTATTCAAAGTTACCAATAAGACAGGCCAAGACGTTTAGGGCCAAAAAACAGAATCCAATCAACACGAGACAAATCCCCTCATACTCATTATTACCACAATTATACTGTACTAAAATAGGTTAAATTACAGTTGTATGAAAAACGATAAGAGCAAAATCCTGTTGAGAACCACAAGTATCAGGCGTGACATTTGTTATGAAGGAGTAATCGCGTCATGCTCCTTGAAGACAGAGCCATATATATACAGAGTAAGGCAAACTTGGTTAAGACTGGGAATTCCAATGGTAGCCATGTTGGCACCAAAAGCTTGGAACACTTGGAGACAACATGGCCGACAGTTTCGCAAACTATGTATGTCTATGGCTCTGCTGTAGGGTTGCCATCGTCGCCCCCTTCAGGGCCTGAAAGGGGAGTGCAAATCCCAGGCCAGACTAGCTTTGACCAGTTTGGGGACCTGACCCGGATCTGTGAGTCTGCTGAGTGATAGGCCCAGCGCAGGTGCCAGCAGAACTCAgaagagacaggaaacagccaGCGGAACCAGGGCTGCAGACACAAAGTAGTTTACACGGTATAGATGGAGTGGGGAGAAAGTCACCATGGCAACGGAGAGAGGCAACAGCAGGCGGGATGTGATAGG
>TU295684
TTTCTTCTCACAACTTTATTTAAACAGCAATAATGCTAACAATTGCACAAATCTGTTATAATaacattagatttaaaaaaaattacaatataAAAGAAACACCAAAGCAATCTCTTTTTTTTGTTGCGACAATGCTAAAACCTGAGAATTGAGTATGCCGGTCCTTGTCACTTGACCTATAACCTAACTGTAGAAACAGACTCCAAACATTCACTCAGGCAAGGTCTTTTTGGGTCCAATTTAATTTTTGGAACATTTCTTGTTCAGCAAAGGTCAGCAAGAGACCATCTTCACACAACGAGGACCAGTTCGAGATAGGAGGTTATAGGTTGAAAGTCACCTGGGACAGAAACAGCAAGAGACCGCATCAGTAACATGACTATCAGTGTGTAACGACAGTTTGGTAACACTTAACTGGATGTTCACTTCCCTATAGTCAACAGAACATCAAAGAGCAAGTGGAGACCCAAACAAACTTTTAGCATTCATCTGGACTTTGCAGCTGCCGAACTAAATCCACCACTCTAGTTGAATATGTATGATGGGACATTTACATGCAAGTATTTTGTCCTTGGGTGTGAATCAAAGAagtagtgtggggggtggggggggggggggtcgctgtGGAGTTGAAGTCTGTCTTAGCATCCTAGTTGCAACAGTAAAGCTACAACAGCACAAAGCAACAGCAATTCACTTCATTGGACACACAATATGTACAATTTGGAGACACTTTCCTTAAAATCATCAGCTATATCCTTGGTATAATCATTCGTCATTCCACAAGCAGCCACCATCTACACCGTTACTCTTAACGTGATCATATACATTTTCAGGCAATCATAACGTGAATTATGTCTGCTTTTAATAACAAACAACTGTTATGACCACTTACAGTTGCAATAACagattttaatttaaaaaaattatgacTGCTAACATTACAATCATAACAGCTATGAATGCAAACAGGCATTTCGGGGTTCAAGGAACAGTATTCCATACAAtgattgttatttatttaacttgtGTAGTGCTTTTCATTACATAAAAATAATCTCAAAGAGCCTAAAAAGCTAAACAAACATATTTAAATTGAGATATGCTTGTGGCGACAGCTTCACTCTGGTTGGTTACGTTAGAACATGAGTAGTTGCCGAGGTGTCAATCTCACTTCAGAAATCACGGGCACCGGTCACAGTGAACACCAATAaaaaaggagaagaaaaaaaatctaccaTATTCATAGAAAACATATGCCCATTTATACTAGTTTTACCACAAAGTTTCATCTATATAAATCTGGTCACAATTCACATTTGGAGTGAGGCAGAGTATGTACGTTTCAAAGCACTAAAAACTGCACCACATTGACATACTATAGTTTAGTACACACAAAGCACCCGCACTAAAGGCCTTACATACttatgcacacacatacaaacaaacaggtacattcacagtgcaggtgaCACGGGGGAGAGGGGGGGTGTTGTCGGGGAGAGTGTGTAGTATATGCGTGTGTGTTCGTGCTGGAGTGAGTTTGGTCTCTTTAAATTGAAGCTAGCTAGGATGGACAAAGGTGTTCAATTCCTAGCCTGTCTTGTTGAGCTTGAAAAGTCGTAACACTGTACAAGAACCAAGTTGCCTTTACCTTGACATAACACCGTTGAGGCTTTGTCAAGTCATTTAACATACACCAACATAACCTGTTCCATTCCATGTAACTATTCTGTATTTGAAATCTGTTCTGTCTTGCAAATTAAAGTGTTAAGACAGCTACAAACAAGAGTTATGCTCACTACTGTTGAACTCAGATGACCAGATTAGTCACTTGTCAGAGATGCTGGTCTATGTCACAATCGTATGCCCTATACTAGGGAAGTGTCTTGATtgacaggcagagaggagagtgaatgcGTGGAGGGGGAGGGGCAAATCGGCAGAAAGGCACTAGCTGCTTTGTCCAAGGGATGCCAACAGAGTTGGGGTCAAGGGGTGCTGGTGAGCATCAAAAgtacacgtacaaacacacagacactattGGTTAATTCTTACAAAACAATTGTCAAAAAACACCACTAACACAATCCACTGTGTTGTACATTGGAGTGGAGCTATGGCTGATAGGGTTTTACGCAAACACACCCACCTTGAATTAGCAAACAGTAGAGGGTGAAACAGTCTAAAAGGCACCATCTCTGGTGCCTCCATGTATCGGTGGCAATAGGGCTCCTTCATCTGATCCTGAAGATCTACAACCCTGTGCTTTCATTACGACAATGAGGGTAATACACGTGTCTGCCTTGTGGAGACCAAGCCGATGTCAGTTTGTGAACTGTATTTCAATGCAGGAGCTATGTGTCTTTAGAAAGTCCAGTTTGGAAAAATGTGAGGTAACTGATTAAGGCAAATGGAAATACCAAGTGCTGATGTTTTCCAAGTAAGTAACGACTCTTCTAGTAAATAATAGGGGCCATGGCCTCTTAAcgacatcaataaaataaaaaaaagccaaAGATCCCTTTAAAGCTAGCTCTTCAAGCAGAGGACATTTTGTTAAATCAGAAATAGACAGTAGCTTGTAACAGAATAGCAGAGTCGCATGATAGGCCTGTTTGCAAGGTAATATCAGATCTAATATACTCTAGTATGGATAACATCAACCTGGACTCCGTCCATAGAGACGCAAGATAGCAGTTGAAGAAGGTTTGAGGGTGTGGTAAGAGTTTAAGAAAACCTTTCAAATCTTTACACTGTCAAAAGCATGACGGAACATGTCCGGTGTAGTTACAATAGCTAGCCAAGCAAGCGAGTTAGCCACGGTCATCTTGCATACAGTAACAGCTAGCTGCATGACATCATTGTAACTAAGGTTGCAAAGGGAGGGAATGTTACTGGTAACTTTCAAAATtgaccagtaaactaccagactTTTGAAAAGTTTAAGGTTTTTAATAAATTTTCATagcatgtaaaatatatttttttaattgtataAATGGTAAATTACAGGTAGTTTTGCAACCCTAATTGCAACACTTGACTGCTTATGACATCTTACTAATGACAGAGTAAAGGTAGCTAGCTTCATGAGTGTATTCAAAGTTACCAATAAGACAGGCCAAGACGTTTAGGGCCAAAAAACAGAATCCAATCAACACGAGACAAATCCCCTCATACTCATTATTACCACAATTATACTGTACTAAAATAGGTTAAATTACAGTTGTATGAAAAACGATAAGAGCAAAATCCTGTTGAGAACCACAAGTATCAGGCGTGACATTTGTTATGAAGGAGTAATCGCGTCATGCTCCTTGAAGACAGAGCCATATATATACAGAGTAAGGCAAACTTGGTTAAGACTGGGAATTCCAATGGTAGCCATGTTGGCACCAAAAGCTTGGAACACTTGGAGACAACATGGCCGACAGTTTCGCAAACTATGTATGTCTATGGCTCTGCTGTAGGGTTGCCATCGTCGCCCCCTTCAGGGCCTGAAAGGGGAGTGCAAATCCCAGGCCAGACTAGCTTTGACCAGTTTGGGGACCTGACCCGGATCTGTGAGTCTGCTGAGTGATAGGCCCAGCGCAGGTGCCAGCAGAACTCAgaagagacaggaaacagccaGCGGAACCAGGGCTGCAGACACAAAGTAGTTTACACGGTATAGATGGAGTGGGGAGAAAGTCACCATGGCAACGGAGAGAGGCAACAGCAGGCGGGATGTGATAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295683 False 3739 lncRNA 0.41 2 42586284 42590360
TU295684 True 3739 lncRNA 0.41 2 42586284 42590360

Neighbor

gene id symbol gene type direction distance location
LOC110520683 NA coding downstream 128578 42455124 ~ 42457706 (-)
LOC110519982 LOC106586070 coding downstream 222016 42339910 ~ 42364268 (-)
LOC118936375 LOC106581667 coding downstream 246630 42334907 ~ 42339654 (-)
LOC110519978 LOC106586070 coding downstream 251489 42329639 ~ 42334795 (-)
col6a3 LOC106598405 coding downstream 256657 42291728 ~ 42329627 (-)
LOC118955837 NA coding upstream 2006 42592366 ~ 42617176 (-)
LOC110519987 LOC106586109 coding upstream 356384 42946744 ~ 43004057 (-)
LOC110519985 LOC106586111 coding upstream 425340 43015700 ~ 43051414 (-)
LOC110519993 LOC106586116 coding upstream 930971 43521331 ~ 43626170 (-)
LOC118956029 NA coding upstream 1116521 43706881 ~ 43741802 (-)
G259700 NA non-coding downstream 138770 42447287 ~ 42447514 (-)
G259691 NA non-coding downstream 146778 42439280 ~ 42439506 (-)
G259685 NA non-coding downstream 152866 42433201 ~ 42433418 (-)
G259579 LOC106586070 non-coding downstream 283775 42290259 ~ 42319385 (-)
G259830 NA non-coding upstream 76635 42666995 ~ 42741571 (-)
G259828 NA non-coding upstream 89631 42679991 ~ 42682741 (-)
G259941 NA non-coding upstream 240136 42830496 ~ 42894992 (-)
G259954 nckap5 non-coding upstream 265959 42856319 ~ 42863117 (-)
G259959 NA non-coding upstream 277489 42867849 ~ 42873169 (-)
G259576 LOC106599288 other downstream 258289 42285630 ~ 42327995 (-)
G259259 sdpr other downstream 818696 41763817 ~ 41767588 (-)
G256632 NA other downstream 2250844 40335210 ~ 40335440 (-)
G261580 NA other upstream 1399164 43989524 ~ 44031505 (-)
G262993 NA other upstream 2419812 45010172 ~ 45012249 (-)
LOC110520012 cssa21h2orf88 other upstream 2508980 45099333 ~ 45104286 (-)
G263274 NA other upstream 2945972 45536332 ~ 45537542 (-)
G265988 NA other upstream 5008858 47599218 ~ 47599815 (-)

Expression


Co-expression Network