XLOC_022084 (CU693481.1)


Basic Information

Item Value
gene id XLOC_022084
gene name CU693481.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 1644754 ~ 1660708 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043643
atatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttttttttttttttttttttaagtcataaaACTTTAAAAGTCCTGTAATAACCCCCAGTGGCACTCCCGGGTTTTCCAGTGATTATTTCAGTGAGTGCTCTATAGAGGGTTCATTTTTaactatttccttttttttttttgaatgactaAAACAGATATCAAAtgctaatttaattaaaatatttatatataaatgttcaagtttaattattgaaatgtttagaGTCTAATAACTGtctttgtgtatttttcttttttcaggcATCAGGTACGGCTGATCTGGAGCAAAAAACAGTATCTGTTCAAATCGAAATCCACACTCATTAAAAAATGTCGTTTTTAAGCTGAGATTTGTTAAAACCTCTTtcgttttcttttgtttttcaggCAGCTTGATGACTGTGAATGTGTTTACGGTGACGTCAAAGAGTGCAGTGCTGCGCTGGAGCAGATATGATGGTGCGCTGTCCTACAGAGTTACAGCTTCTCTACGCAACTCTCCAGTGCCTCTGGTCTTTGCTAGTTTTGGACAAAACACTGTTCTGGGATCTGTTAACTCCCTGAACCCCAACACGGCTTACACCTTTCGTGTGGAGGCACTGGATAGCCTCATGAACGGACTGGCAGACGCTAATGTGGATGGATCTACAGCTCCGGATGTGCCGTCCATCCTGATGGCCTCCTCCAAAGAGAGTCCCAGTATCACAGTGGAGTTCACTGAGGTCAGCGGAGCCACTTCATACATCCTGCGCGCAGAGACCAGCGACGGCTCTTTCTTCACAGAGATCCAAGTTTCCAGCTCTCCGGGGACCGTCACCGGCCTGCAGCCATACACACTCTACAGTCTCAGCGTCATGTCCGTCAACAGCGCAGGCCGGAGCCAGCCATCCATCTCCGTGGAGGCTAAGACAGTCCTCCCTGCACCGCAGCTCAAACCCAGCTCTCCCAGTAACAGCAGCATCCTGGTGAAGTGGGATCCGGTGAACAACACTGTGCTCTACAGCCTCAGCATCATCAATGACATCTCGTACAGTCGCAGTCGCATCAACACCACCGGCACAGAGCTTCTCTTTCCAGATCTAGAAGCAGGAACTCGCTATTGCATTAAGGGGAATTCCTGGAGTCCTGAACACATTGCCGGAGACGACTTCACCATTTGCCAGATCACACGTTCTCCAACTCCTCAGTCAGTTGCTGTAGTGGTGACCAGCACCCCTGAGGCTGGTATAGTTGTGTCCTGGGATTCTGCCCAGGGTGCAGAGCAGTATGTGGCCTGGAGCTCGACCGGACACAACTGCTCTTCGTCCACGAACTCCTGCACCCTGATTCCTCTGATCTGCGGAGAGACAAAATCTGTCACAGTGACTGCGGTCAACCAGGCTGGAAGTAGTATCCCCTCATACCCAGTGCAGATCATTTCATTCCCTTGTCCCCCGCAGCCCATTTGGGTGGAGGAGGCAGTGCCCGGTAACTGCTCTGTGAAGTGGAGCTCAGTCCCTCATGCAGACTACTACACCACCTTTATTAAGAGCGACGACGGCATCGAGGGGACGTGCAACTCAACCAATCCATTCTGTCAGTTCCACTGCAACTGCGGCTACTCGTACATCATGACTGTGTTTGCGCACAACCATGCTGGATCCAGTCCTCCAGGACCGCTCCTCAACCACACCACCTTGCCTTGCTGTCCAGAGCTCACCACGGTGTCTGCAGTTTCTTGGGAGACGTTGATGATCGAGTGGTCCCCTGTGCGCGGTGCAGATCTATATGAGACGCGTGCTGTAGATTCAGTGCAGCCGGTTTTGTGTAACGACACGGCTCCCAAATGTGCCCTTTCTGACCTTGCTTGCAACACCAATTACAGTGTCGTCGTCATACCGTGCAATGACATAAGTGGCTGCAACCTCACCTGCCGTCCACAAGTGCATGAAACAGCTCCATGCATGCCTGAGATCACCAGTGTGAGCCAGAGTAACACGTCAGGTGTGTTGATCACCTGGACTTCAGATAACACGCTCGCCAACTATACCGTCACTGTGATTGGCCAAGTAGGTGACACACACATCTGTCAGTCAAATGGTACTTCCTGTCAGGTAACCGACCTGCCCTGTGGCTCCATCTATGAAGTCAGCGCCACAGCCAAAACCTCCGCTGGAGAAAGCATGCCCAGCTACACCGTTCCACTGGAAACAGGTCAGGTTTACAgcacaattcatttattcatttaccgtttatgcaaggtgtttgtaatgcagaaTGGTCACgggacagtaaatctgacattattctctcctctggctgccgttatcagtctcacactattgttttcctctttctgaaagtcttgataaaacCATCCTTGAGTTTTTCTGCCATGTTTTCagcaaatattattgtaaataaaggATTTGTTGTACTCACGCATTCCCTTACATGATGACTTCTGTTGCTGGGTCCATAATAGATATTTAGATAGATATCCATAATATATCCataatagatatttttaaaaaaaatgttgaacctgtaaacactg
>TCONS_00043644
GGTGAACAGGTCTGAGACGCATTCAAGCTTCATGTATATTCAGTCAAAACAGAAGAACAGAAGAGAGTGCAGAGCTCAGAATAAAACAACAGGGAAAATAAGAGGAAAATTAGGATTTTAAACAGATGGCAGGCCTTGGAGGCATTAAGGAGCTGGTGTTTTTGCTTGGAGTAGTCTCACAGGTAtcaggCAGCTTGATGACTGTGAATGTGTTTACGGTGACGTCAAAGAGTGCAGTGCTGCGCTGGAGCAGATATGATGGTGCGCTGTCCTACAGAGTTACAGCTTCTCTACGCAACTCTCCAGTGCCTCTGGTCTTTGCTAGTTTTGGACAAAACACTGTTCTGGGATCTGTTAACTCCCTGAACCCCAACACGGCTTACACCTTTCGTGTGGAGGCACTGGATAGCCTCATGAACGGACTGGCAGACGCTAATGTGGATGGATCTACAGCTCCGGATGTGCCGTCCATCCTGATGGCCTCCTCCAAAGAGAGTCCCAGTATCACAGTGGAGTTCACTGAGGTCAGCGGAGCCACTTCATACATCCTGCGCGCAGAGACCAGCGACGGCTCTTTCTTCACAGAGATCCAAGTTTCCAGCTCTCCGGGGACCGTCACCGGCCTGCAGCCATACACACTCTACAGTCTCAGCGTCATGTCCGTCAACAGCGCAGGCCGGAGCCAGCCATCCATCTCCGTGGAGGCTAAGACAGTCCTCCCTGCACCGCAGCTCAAACCCAGCTCTCCCAGTAACAGCAGCATCCTGGTGAAGTGGGATCCGGTGAACAACACTGTGCTCTACAGCCTCAGCATCATCAATGACATCTCGTACAGTCGCAGTCGCATCAACACCACCGGCACAGAGCTTCTCTTTCCAGATCTAGAAGCAGGAACTCGCTATTGCATTAAGGGGAATTCCTGGAGTCCTGAACACATTGCCGGAGACGACTTCACCATTTGCCAGATCACACGTTCTCCAACTCCTCAGTCAGTTGCTGTAGTGGTGACCAGCACCCCTGAGGCTGGTATAGTTGTGTCCTGGGATTCTGCCCAGGGTGCAGAGCAGTATGTGGCCTGGAGCTCGACCGGACACAACTGCTCTTCGTCCACGAACTCCTGCACCCTGATTCCTCTGATCTGCGGAGAGACAAAATCTGTCACAGTGACTGCGGTCAACCAGGCTGGAAGTAGTATCCCCTCATACCCAGTGCAGATCATTTCATTCCCTTGTCCCCCGCAGCCCATTTGGGTGGAGGAGGCAGTGCCCGGTAACTGCTCTGTGAAGTGGAGCTCAGTCCCTCATGCAGACTACTACACCACCTTTATTAAGAGCGACGACGGCATCGAGGGGACGTGCAACTCAACCAATCCATTCTGTCAGTTCCACTGCAACTGCGGCTACTCGTACATCATGACTGTGTTTGCGCACAACCATGCTGGATCCAGTCCTCCAGGACCGCTCCTCAACCACACCACCTTGCCTTGCTGTCCAGAGCTCACCACGGTGTCTGCAGTTTCTTGGGAGACGTTGATGATCGAGTGGTCCCCTGTGCGCGGTGCAGATCTATATGAGACGCGTGCTGTAGATTCAGTGCAGCCGGTTTTGTGTAACGACACGGCTCCCAAATGTGCCCTTTCTGACCTTGCTTGCAACACCAATTACAGTGTCGTCGTCATACCGTGCAATGACATAAGTGGCTGCAACCTCACCTGCCGTCCACAAGTGCATGAAACAGCTCCATGCATGCCTGAGATCACCAGTGTGAGCCAGAGTAACACGTCAGGTGTGTTGATCACCTGGACTTCAGATAACACGCTCGCCAACTATACCGTCACTGTGATTGGCCAAGTAGGTGACACACACATCTGTCAGTCAAATGGTACTTCCTGTCAGGTAACCGACCTGCCCTGTGGCTCCATCTATGAAGTCAGCGCCACAGCCAAAACCTCCGCTGGAGAAAGCATGCCCAGCTACACCGTTCCACTGGAAACAGGTCAGGTTTACAgcacaattcatttattcatttaccgtttatgcaaggtgtttgtaatgcagaaTGGTCACgggacagtaaatctgacattattctctcctctggctgccgttatcagtctcacactattgttttcctctttctgaaagtcttgataaaacCATCCTTGAGTTTTTCTGCCATGTTTTCagcaaatattattgtaaataaaggATTTGTTGTACTCACGCATTCCCTTACATGATGACTTCTGTTGCTGGGTCCATAATAGATATTTAGATAGATATCCATAATATATCCataatagatatttttaaaaaaaatgttgaacctgtaaacactg
>TCONS_00044711
GTTCTCCAACTCCTCAGTCAGTTGCTGTAGTGGTGACCAGCACCCCTGAGGCTGGTATAGTTGTGTCCTGGGATTCTGCCCAGGGTGCAGAGCAGTATGTGGCCTGGAGCTCGACCGGACACAACTGCTCTTCGTCCACGAACTCCTGCACCCTGATTCCTCTGATCTGCGGAGAGACAAAATCTGTCACAGTGACTGCGGTCAACCAGGCTGGAAGTAGTATCCCCTCATACCCAGTGCAGATCATTTCATTCCCTTGTCCCCCGCAGCCCATTTGGGTGGAGGAGGCAGTGCCCGGTAACTGCTCTGTGAAGTGGAGCTCAGTCCCTCATGCAGACTACTACACCACCTTTATTAAGAGCGACGACGGCATCGAGGGGACGTGCAACTCAACCAATCCATTCTGTCAGTTCCACTGCAACTGCGGCTACTCGTACATCATGACTGTGTTTGCGCACAACCATGCTGGATCCAGTCCTCCAGGACCGCTCCTCAACCACACCACCTTGCCTTGCTGTCCAGAGCTCACCACGGTGTCTGCAGTTTCTTGGGAGACGTTGATGATCGAGTGGTCCCCTGTGCGCGGTGCAGATCTATATGAGACGCGTGCTGTAGATTCAGTGCAGCCGGTTTTGTGTAACGACACGGCTCCCAAATGTGCCCTTTCTGACCTTGCTTGCAACACCAATTACAGTGTCGTCGTCATACCGTGCAATGACATAAGTGGCTGCAACCTCACCTGCCGTCCACAAGTGCATGAAACAGCTCCATGCATGCCTGAGATCACCAGTGTGAGCCAGAGTAACACGTCAGGTGTGTTGATCACCTGGACTTCAGATAACACGCTCGCCAACTATACCGTCACTGTGATTGGCCAAGTAGGTGACACACACATCTGTCAGTCAAATGGTACTTCCTGTCAGGTAACCGACCTGCCCTGTGGCTCCATCTATGAAGTCAGCGCCACAGCCAAAACCTCCGCTGGAGAAAGCATGCCCAGCTACACCGTTCCACTGGAAACAGGTCAGGTTTACAgcacaattcatttattcatttaccgtttatgcaaggtgtttgtaatgcagaaTGGTCACgggacagtaaatctgacattattctctcctctggctgccgttatcagtctcacactattgttttcctctttctgaaagtcttgataaaacCATCCTTGAGTTTTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108006

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043643 False 2608 mRNA 0.46 7 1644754 1658980
TCONS_00043644 False 2338 mRNA 0.50 8 1644754 1660708
TCONS_00044711 True 1199 lncRNA 0.52 4 1644921 1649166

Neighbor

gene id symbol gene type direction distance location
XLOC_022079 NA coding downstream 4447 1513309 ~ 1640307 (-)
XLOC_022083 fndc7b coding downstream 56799 1586287 ~ 1587955 (-)
XLOC_022082 fndc7b coding downstream 61561 1580294 ~ 1583193 (-)
XLOC_022081 fbxo30b coding downstream 73072 1561931 ~ 1571682 (-)
XLOC_022080 epm2a coding downstream 87559 1526708 ~ 1557195 (-)
XLOC_022085 prdm5 coding upstream 265854 1926562 ~ 2037659 (-)
XLOC_022086 ndnf coding upstream 389651 2050359 ~ 2099350 (-)
XLOC_022087 NA coding upstream 502682 2163390 ~ 2168177 (-)
XLOC_022088 NA coding upstream 584741 2245449 ~ 2257461 (-)
XLOC_022089 NA coding upstream 759826 2420534 ~ 2421706 (-)
XLOC_022077 CR376840.1 non-coding downstream 426253 1218382 ~ 1218501 (-)
XLOC_022076 NA non-coding downstream 465590 1177395 ~ 1179164 (-)
XLOC_022074 CABZ01079872.1 non-coding downstream 504694 1124514 ~ 1140060 (-)
XLOC_022073 CABZ01079870.1 non-coding downstream 520783 1118305 ~ 1123971 (-)
XLOC_022092 NA non-coding upstream 1067396 2728104 ~ 2729009 (-)
XLOC_022093 NA non-coding upstream 1181691 2842399 ~ 2844254 (-)

Expression


Co-expression Network