XLOC_022093


Basic Information

Item Value
gene id XLOC_022093
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 2842399 ~ 2844254 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044940
GTAGTAAGTGTGTAGTAGAGGTGTCGTTACCAGGAGAGGGTGTAGTAGAGGGTAGAGTAGAGGTGTAGTTACCAGAAGAAGATGTAGTAAAGGTGTATTAAAGGGTGTAGTGGATGTGTCGTTACCAGAAGGATAGGGTGTAGTAGAGGTGTCGTTACAAGAAGGAGAGGGAATAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCGTTACCAGGAGAGGGTGTAGTAGAGGTGAAGTTATCAGAATACCAAAAAGATAGGGTGTATTAAAGGGTGTAGTAGAGTTATAGTTACCAGACCCAGAGGGTGTGTAGTAAAGGCCGGAGTAGAGGTGTAGTTACCAGAAGGAGAGGGTGTAGTAGAGGATAGAGTAGAGGTGTAGTTACCAGAAGAAAATGTAGTAAATGTGTAGTAAAGGGTGTAGTGGATGTGTCGTTACCAGAAGGAGAGGGTGTAGTAGAGGATAGAGTGGAGGTGTAGTTACCAGAAGAAGATGTAGTAAAGGTGTAGTAAAGGGTGTAGTGGATGTGTCGTTACCAGAAGGAGAGGGTGTAGTAGAGGATAGAGTAGAGGTGTAGTTACCAGAAGAAGATGTAGTAAAGGTGTAGTAAAGGGTGTAGTGAATGTGTCGTTACCAGAAGGAGAGGGTGTAGTAGAGGTGTTGTTACAAGAAGGAGAGGGAATAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCGTTACCAGGAGAGGGTGTAGTAGAGGTGTAGTAGAGGTGTTGTTACAAGAAGGAGAGGGTGTAGTAGAGGTGAAGTTACCAGAATACCAAAAAGATAGGGTGTATTAAAGGGTGTAGTAGAGTTATAGTTACCAGACCCAGAGGGTGTGTAGTAAAGGCCGGAGTAGAGGTGCAGTTACCAGAAGGAGAGGGTGTAGTAGAGGGTAGAGTAGAGGTGTAGTTACCAGAAGAAAATGTAGTAGAGTTGTAGTAAAGGGTGTAGTAGAAGTGTCGTTACCAGGAGAGGGTGTAGTAAGGGTGTAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCATTACCATAAAGAGAGGGAGTAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCGTTACTAGAAGGAGAGGGTTTACTAGAGGAGTAGTAGTGGTGTAGTTACCAGAAGGAGAGGGTGTAGTCTCCTACAAAGGTCTCGCTCTCCCGCACTAGGA
>TCONS_00044941
GCCTGAGGAGATCAAACACACGTAAAGGATGAAGTAGAGGTGTAGTTAGGAGATGCAGAGGGTGTGTAGTAAAGGGTGGAGTAGAGGTGTAGTTACCAGAATACCAAAAAGATAGGGTGTAATAAAGTGTGTAGTAGAGGTGTAGTTACTAGATGCAGAGGGCGTGTAGTAAAGGGTGGAGTAGAGAGAGGTGTAGTTACCAGATGCAGAGGGTGTGTAGTAAAGGGTGGAGTAGAGGTGTAGTTACCAGAAGGAGAGGGTGTAGTAGAGGGTAGAGTGGAGGTGTAGTTACCAGAAGAAAATGTAGTAAAGGTGTAGTAAAGGGTGTAGTGGATGTGTCGTTACCAGAAGGAGAGGGAATAGTAGAGGTGTAGTAAGTGTGTAGTAGAGGTGTCGTTACCAGGAGAGGGTGTAGTAGAGGGTAGAGTAGAGGTGTAGTTACCAGAAGAAGATGTAGTAAAGGTGTATTAAAGGGTGTAGTGGATGTGTCGTTACCAGAAGGATAGGGTGTAGTAGAGGTGTCGTTACAAGAAGGAGAGGGAATAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTTGTTACAAGAAGGAGAGGGTGTAGTAGAGGTGAAGTTACCAGAATACCAAAAAGATAGGGTGTATTAAAGGGTGTAGTAGAGTTATAGTTACCAGACCCAGAGGGTGTGTAGTAAAGGCCGGAGTAGAGGTGCAGTTACCAGAAGGAGAGGGTGTAGTAGAGGGTAGAGTAGAGGTGTAGTTACCAGAAGAAAATGTAGTAGAGTTGTAGTAAAGGGTGTAGTAGAAGTGTCGTTACCAGGAGAGGGTGTAGTAAGGGTGTAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCATTACCATAAAGAGAGGGAGTAGTAGAGGTGTAGTAAGGGTGTAGTAGAGGTGTCGTTACTAGAAGGAGAGGGTTTACTAGAGGAGTAGTAGTGGTGTAGTTACCAGAAGGAGAGGGTGTAGTCTCCTACAAAGGTCTCGCTCTCCCGCACTAGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044940 False 1211 lncRNA 0.45 2 2842399 2843884
TCONS_00044941 True 1028 lncRNA 0.45 3 2842399 2844254

Neighbor

gene id symbol gene type direction distance location
XLOC_022092 NA coding downstream 113390 2728104 ~ 2729009 (-)
XLOC_022091 snai1b coding downstream 329099 2502181 ~ 2513300 (-)
XLOC_022090 PRSS35 coding downstream 394165 2446978 ~ 2448234 (-)
XLOC_022089 NA coding downstream 420693 2420534 ~ 2421706 (-)
XLOC_022088 NA coding downstream 584938 2245449 ~ 2257461 (-)
XLOC_022094 zhx3 coding upstream 28601 2872855 ~ 2901167 (-)
XLOC_022095 NA coding upstream 115964 2960218 ~ 2992107 (-)
XLOC_022096 AL954726.1 coding upstream 211727 3055981 ~ 3056096 (-)
XLOC_022097 mafba coding upstream 561411 3405665 ~ 3409140 (-)
XLOC_022098 NA coding upstream 606744 3450998 ~ 3451379 (-)
XLOC_022087 NA non-coding downstream 674222 2163390 ~ 2168177 (-)
XLOC_022079 NA non-coding downstream 1202092 1513309 ~ 1640307 (-)
XLOC_022102 NA non-coding upstream 883836 3728090 ~ 3730606 (-)
XLOC_022117 FO904870.1 non-coding upstream 2275478 5119732 ~ 5126166 (-)

Expression


Co-expression Network