XLOC_022095



Basic Information


Item Value
gene id XLOC_022095
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 2960218 ~ 2992107 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044942
CGGGACGCTAACATTTCGGCGGTGGGCGTAATATGGGTGCTGTGCATTTGGTTTTCCAGACGCTCCTGCTGATCTGCTCTGTCCGGGGCCCGGCTGACATCCCGCTCCACCATTTGAGGGCCAGTTGCCAACCGATGAAGGATCTTCCTTCCAATTCACTTGTTATTGTGCTGTCCAGGTGACAAGTATACCTATAGAGTCCTTCTCCGAGTCGGACGGACTGGGTGTAATATGTTTAGTCACGTCCCTCCAGCCATTAGTGTACTGCCAGTGAAAGATGAGGAGTGCTAAAGGAAAGCcacaccccctactcaatattgcATTTCAGCTGGAAATCATCATCATACTGGAATAAAAGTCTAAAGCAACTTCTGGTTCTGCAGACTTTAACATCTCCTTAAATGCAACAGGTCACACAGGTTCCACAGGATATTAATGGGTAGGTAAACAACTGACCGTTTCTATACTTATGGTGAGTTCAAGTAAAGTATTTAGGAGTTGAATGAATTGTATatgaattgtttttattgtttacatttgttttgct

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044942 True 547 lncRNA 0.45 3 2960218 2992107

Neighbor


gene id symbol gene type direction distance location
XLOC_022094 zhx3 coding downstream 59051 2872855 ~ 2901167 (-)
XLOC_022093 NA coding downstream 115964 2842399 ~ 2844254 (-)
XLOC_022092 NA coding downstream 231209 2728104 ~ 2729009 (-)
XLOC_022091 snai1b coding downstream 446918 2502181 ~ 2513300 (-)
XLOC_022090 PRSS35 coding downstream 511984 2446978 ~ 2448234 (-)
XLOC_022096 AL954726.1 coding upstream 63874 3055981 ~ 3056096 (-)
XLOC_022097 mafba coding upstream 413558 3405665 ~ 3409140 (-)
XLOC_022098 NA coding upstream 458891 3450998 ~ 3451379 (-)
XLOC_022099 rnf114 coding upstream 511489 3503596 ~ 3511630 (-)
XLOC_022100 pacsin1a coding upstream 661279 3653386 ~ 3703569 (-)
XLOC_022089 NA non-coding downstream 538512 2420534 ~ 2421706 (-)
XLOC_022088 NA non-coding downstream 702757 2245449 ~ 2257461 (-)
XLOC_022087 NA non-coding downstream 792041 2163390 ~ 2168177 (-)
XLOC_022102 NA non-coding upstream 735983 3728090 ~ 3730606 (-)
XLOC_022117 FO904870.1 non-coding upstream 2127625 5119732 ~ 5126166 (-)
XLOC_022118 NA non-coding upstream 2198670 5190777 ~ 5199754 (-)

Expression



Co-expression Network