XLOC_022098



Basic Information


Item Value
gene id XLOC_022098
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 3450998 ~ 3451379 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044943
cttgagcacccctgctttaggtaCTACTGTGCATTTTTCAGTAGGATCCACTAAACCTGGTCAATCTCAAGAAGCTGAGACTTCCTCCGGTGTCTTTGACTGCACTAAGAAGCTCTTCAATATTTCAGTGAAAATGAACTGTGGTCTCCCTGGACCAATCTAGTGTAGAATTGCTACGATTCACTCTTTACGACCCTTTTGTCCTAATGTTTAAGCTGTCTATATCCTGGAGGATGTGAACGAGGACCAGGGGAGCCCTCGGGCCGAATTTGAGAcataaagaataattaaaaataaatgcagg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044943 True 304 lncRNA 0.43 2 3450998 3451379

Neighbor


gene id symbol gene type direction distance location
XLOC_022097 mafba coding downstream 41858 3405665 ~ 3409140 (-)
XLOC_022096 AL954726.1 coding downstream 394902 3055981 ~ 3056096 (-)
XLOC_022095 NA coding downstream 458891 2960218 ~ 2992107 (-)
XLOC_022094 zhx3 coding downstream 549831 2872855 ~ 2901167 (-)
XLOC_022093 NA coding downstream 606744 2842399 ~ 2844254 (-)
XLOC_022099 rnf114 coding upstream 52217 3503596 ~ 3511630 (-)
XLOC_022100 pacsin1a coding upstream 202007 3653386 ~ 3703569 (-)
XLOC_022101 nudt3a coding upstream 259567 3710946 ~ 3721444 (-)
XLOC_022102 NA coding upstream 276711 3728090 ~ 3730606 (-)
XLOC_022103 hmga1a coding upstream 300072 3751451 ~ 3759692 (-)
XLOC_022092 NA non-coding downstream 721989 2728104 ~ 2729009 (-)
XLOC_022089 NA non-coding downstream 1029292 2420534 ~ 2421706 (-)
XLOC_022117 FO904870.1 non-coding upstream 1668353 5119732 ~ 5126166 (-)
XLOC_022118 NA non-coding upstream 1739398 5190777 ~ 5199754 (-)
XLOC_022119 CR936540.1 non-coding upstream 1759642 5211021 ~ 5365345 (-)
XLOC_022120 dre-let-7a-5 non-coding upstream 1979817 5431196 ~ 5431319 (-)

Expression



Co-expression Network