XLOC_022113 (taz)


Basic Information

Item Value
gene id XLOC_022113
gene name taz
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 4915595 ~ 4925724 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043687
TGAATGTTTTGTGCATTCCTCTTAACAAAAAAAGGAGACCCACGACTAcaaaactacaactcccatgagCACCCAGGTTTGTACACTACTTCCGGTAGCGTGTTTTTCTGCGCCCATCGGTTGTCGAGACGGAAGGTGGGAAGATTAAAGATTATAGTTTgttcaaatattacatttaataataaatcaaactcaCATTATAGTTAATTTTGATACCACAGACAATGTCCAAATGTTGAACTGCATTCGTAACTAAATTTAGCCACGTGATATCACCCTTGTTTACGTGTTTAAAATGAGTAGAAGTTTCTCGTGTTTTGACTTCTTCAGCATGACTATATTTTGTGACAGATTATCGCTGTTTTTTATGTTCacgtatcacattatttattagcGTCATGTAATTTTTACAGCAGCAGCTGCTCCTGTACTTTTAGTTATATTTTTTGCTTGCGCTTTTATCCCAGAAACATTAcgtcacatttaaacaaacacatactCAGTAAATATTTACAGCCAAACTGCATTGAATACTTTACTATCAGCTGGACATTCTTCCAGATGTTGAAGTCTTCTCTGTTACAATGTCTTAGTGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTATGAATGATGTTCTACCAAATGAGACTCCATACATTCCTCGAGTAGGACAGCGGATAACTGTTTTAGTAGGAAAACCGTTCACAGTCAGGCATCTGGTCAATGCACTGCGAGCTGAAAACACGAATCCGACGGAAATGCGGAAAACAGTGACGGACTATATTCAAGACGAATTTCGCAGTTTGAAAGCCCAGGCAGAGGCTCTTCATCATAGGCTACAGAACCACACATGAAGAAGATCGCAAGATCCCTCATCACAGGGGTAAGAAAGTTCAGTCTTGGAGAGCTGCAGAACTTCCCTTGTCAAACGCAGCTGCATGAGTTAATCAAGGTCTTGAAAGCTACAGGCAGGTACAGTTTAATCCAGACTGGGTCAAAACAAGACTGCAAGACTCCAAGACTGAACTTGCTCACCTGTGCCTCATCATTTTTTTAGCCCATCAGCCAACACCTGCCTTACAACTCAGCTAAAACTCTGAGCAGCGGAAATACACACAGATGACTTCATTTAAAGAGGATTATGCACTCGTTTTAATGAATATTATATCCTTGATAATGTGAACATGGATGTAATGTGGGTGCATCAGATAATCTCCTTAATCATCAATCTGAACATGGTGATTTTGTTTGATaaatcagttgtcatttctgaatCAATAACTACGGTCACTGATGTGCATGAGCATGATTTACAATGAGAATGCTGAagcactaaatatttttaaatacagagAGAAATACTTTGAATGACAAAACTAGCGGTTTTTGtactacagtttttatttttgatgcGGTGTTTGACGGTATTTAATACAAAATACTGACTGTAAATACAAAACCTTAATCAGTTTTTTTCTCAGGTGTACCTATGCATTTTATATCTGACAACACATTTTGTAATTTTAGCTTGCCAGTGTGGGACAGAGAAAACATATAGTGATGTACTATGATACAAAATCAAAACTACTCCTACATCAACAAAAAGATGCATTGACCTAGACTAAAAAGCAagtcaaatgtattattattttgtaaaatacatttttaggaAGAAATACACACCTGAAgctatttctaaaaatgtataataaaaatgaaagctGGCCaaactgtgatttatttataaattatgtgATGAAAATGTGAATGGAATGGACAATGGAAAATCTGAATAAAAGTTTTCTTACTGCTGCTTATCTGTGGGATGAATTGTTGGAGTGAATTGATAAAGCGACCTTTAAAGAAAGCATTCATACTTGATTTTTGATCAATGTCAGCAAATTATTCAATTAGATTAACTTATGATGATTAATTACACTAGTAGCATCAGTACAtgaaatattgtgtgtgtgcgtgcgttcatgtgtgtgtgtgtgtctgtgtgtgtgtgtgcatatagtTATTTTCAACAATTCCTTAAGGATTAAATGTCACACCACCAGAACTAAAAGCTTCACATGAAATCATGACAAAATGACTATAATTTAAAAGTGAAAGTAGAGTTACAATGAGATTTTATTTGTAGATCTCCAGGAAATAGAAAGAAGGTCAAATGATGTCACCAGAG
>TCONS_00043688
CACTACTTCCGGTAGCGTGTTTTTCTGCGCCCATCGGTTGTCGAGACGGAAGTGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTATGAATGATGTTCTACCAAATGAGACTCCATACATTCCTCGAGTAGGACAGCGGATAACTGTTTTAGTAGGAAAACCGTTCACAGTCAGGCATCTGGTCAATGCACTGCGAGCTGAAAACACGAATCCGACGGAAATGCGGAAAACAGTGACGGACTATATTCAAGACGAATTTCGCAGTTTGAAAGCCCAGGCAGAGGCTCTTCATCATAGGCTACAGAACCACACATGAAGAAGATCGCAAGATCCCTCATCACAGGGGTAAGAAAGTTCAGTCTTGGAGAGCTGCAGAACTTCCCTTGTCAAACGCAGCTGCATGAGTTAATCAAGGTCTTGAAAGCTACAGGCAGGTACAGTTTAATCCAGACTGGGTCAAAACAAGACTGCAAGACTCCAAGACTGAACTTGCTCACCTGTGCCTCATCATTTTTTTAGCCCATCAGCCAACACCTGCCTTACAACTCAGCTAAAACTCTGAGCAGCGGAAATACACACAGATGACTTCATTTAAAGAGGATTATGCACTCGTTTTAATGAATATTATATCCTTGATAATGTGAACATGGATGTAATGTGGGTGCATCAGATAATCTCCTTAATCATCAATCTGAACATGGTGATTTTGTTTGATaaatcagttgtcatttctgaatCAATAACTACGGTCACTGATGTGCATGAGCATGATTTACAATGAGAATGCTGAagcactaaatatttttaaatacagagAGAAATACTTTGAATGACAAAACTAGCGGTTTTTGtactacagtttttatttttgatgcGGTGTTTGACGGTATTTAATACAAAATACTGACTGTAAATACAAAACCTTAATCAGTTTTTTTCTCAGGTGTACCTATGCATTTTATATCTGACAACACATTTTGTAATTTTAGCTTGCCAGTGTGGGACAGAGAAAACATATAGTGATGTACTATGATACAAAATCAAAACTACTCCTACATCAACAAAAAGATGCATTGACCTAGACTAAAAAGCAagtcaaatgtattattattttgtaaaatacatttttaggaAGAAATACACACCTGAAgctatttctaaaaatgtataataaaaatgaaagctGGCCaaactgtgatttatttataaattatgtgATGAAAATGTGAATGGAATGGACAATGGAAAATCTGAATAAAAGTTTTCTTACTGCTGCTTA
>TCONS_00043689
GTGTTTTTCTGCGCCCATCGGTTGTCGAGACGGAAGTGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTATGAATGATGTTCTACCAAATGAGACTCCATACATTCCTCGAGTAGGACAGCGGATAACTGTTTTAGTAGGAAAACCGTTCACAGTCAGGCATCTGGTCAATGCACTGCGAGCTGAAAACACGAATCCGACGGAAATGCGGAAAACAGTGACGGACTATATTCAAGACGAATTTCGCAGTTTGAAAGCCCAGGCAGAGGCTCTTCATCATAGGCTACAGAACCACACATGAAGAAGATCGCAAGATCCCTCATCA
>TCONS_00043690
GTTTTTCTGCGCCCATCGGTTGTCGAGACGGAAGTGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTATAGACAGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTATGAATGATGTTCTACCAAATGAGACTCCATACATTCCTCGAGTAGGACAGCGGATAACTGTTTTAGTAGGAAAACCGTTCACAGTCAGGCATCTGGTCAATGCACTGCGAGCTGAAAACACGAATCCGACGGAAATGCGGAAAACAGTGACGGACTATATTCAAGACGAATTTCGCAGTTTGAAAGCCCAGGCAGAGGCTCTTC
>TCONS_00043691
TGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGTAGGCGGAGCCTCAGGTGCATGTGTTTGAGTAACAAGCAatttctccaacaacaacaacaacaatcactTTTAACACAATTGAGGCCACAGGCTTTACAGTAGAAACTATAAATGCAGTCATGCTGTTTTTGTATGCTCTGATATCAGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTATGAATGATGTTCTACCAAATGAGACTCCATACATTCCTCGAGTAGGACAGCGGATAACTGTTTTAGTAGGAAAACCGTTCACAGTCAGGCATCTGGTCAATGCACTGCGAGCTGAAAACACGAATCCGACGGAAATGCGGAAAACAGTGACGGACTATATTCAAGACGAATTTCGCAGTTTGAAAGCCCA
>TCONS_00043692
ATCGGTTGTCGAGACGGAAGTGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGTAGGCGGAGCCTCAGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTAAGTTGTGCAGGCGCTTTTGAATGACATGACATGCAGCTATAATGCATAACTTAATGAATTTATATTAGTGCAACTTTCTTATGAGGGCCAAAAGCATCACTTTAACACttggcggaatgaaccgccaacttatccagcacatttttacgcagcggatgcccttccagccacaacccatctctgggaaacatccacacacacacactcatacactatggacaatttagcctacccaattcacctgtaccgcatgtctttggactgtgggggaaaccggtgcacccggaaacccacgcgaacgcagggagaacatgcaaagtcaaTACAGaacaccaactgagccggggatcgaaccagtgaccttcttgctgtgaggcgacagcactatctactgcgccactgcatcgccctgaactcttcatatttggcagctaataataaatatatgctttatatgcaattaaaaaaaacatgaacaaattagGAAAATATCTTTATTGGTTTGACAGCGAACGCTTTGCAAATCTTCACAAAcacataaaa
>TCONS_00043693
TGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTGATGGAGTATATCAGAAAGGAATGGATTTCCTTTTGGAAAGGCTGAATCAAGGGGAATGGATACACATATTTCCGGAGGGTATAGACAGGCAAACTCATGTTTTTTTGGCcttaaaattacatataaataaattatatatatatgataattatatatatatgataaatatatatatatatatatatatatataaatatatatatatacatatgtatatatacatatatacatatatatatatattctccttATAGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGGTAAGATGGTTTTGCTCTAATAATAAGATGCTACTTGTTTGCCCTTTTGATAAGGGCAATcaagtaaattttttatttttaatttttttaaggaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAGGTAAGTTGTGCAGGCGCTTTTGAATGACATGACATGCAGCTATAATGCATAACTTAATGAATTT
>TCONS_00043694
TGTGGTTTAATGCTGTGGCGATGCCCTTGGAGGTGACATGGCCCTTCCCACAATGCCCCCGCCTGGGCTGGAGAATATCCAGCCGAGTGGTCATGGGAATGGTGGGCTCATACAGTTACCTTTGGACCAAGTATTTTAACTCGCTGATGGTGCACAACCAGGACGTCTTGTTGAACCTGGTTGATGAGCGTCCTCAGGACACACCCCTTATCACAGTATGCAATCATCAGTCCTGTATGGATGATCCACACATCTGGGGAGTCCTTAAGTTCCGGCAGTTGTGGAACCTTAACAAGATGAGATGGACACCTACTGCCTCTGATATCTGTTTCACAAGAGAATTTCACTCCAGTTTCTTCAGCAGAGGGAAATGTGTACCTGTTGTTAGAGGTAGAGTTAACATGTCTGGAGAGTTCATGAGGATAAAATGGGgaatTGGACGTTTGATTGCAGAATGTTCTCTTCACCCAATAATTTTACCTATGTGGCATATAG

Function

symbol description
taz Predicted to enable 1-acylglycerophosphocholine O-acyltransferase activity. Involved in several processes, including cardiolipin metabolic process; mitophagy; and spermatocyte division. Predicted to be located in mitochondrial inner membrane and mitochondrial outer membrane. Predicted to be active in mitochondrial membrane. Is expressed in alimentary system; respiratory system; and urinary system. Human ortholog(s) of this gene implicated in Barth syndrome and dilated cardiomyopathy. Orthologous to human TAFAZZIN (tafazzin, phospholipid-lysophospholipid transacylase).

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0006644 phospholipid metabolic process biological_process
GO:0045823 positive regulation of heart contraction biological_process
GO:0007007 inner mitochondrial membrane organization biological_process
GO:0035965 cardiolipin acyl-chain remodeling biological_process
GO:0001947 heart looping biological_process
GO:0031307 integral component of mitochondrial outer membrane cellular_component
GO:0031966 mitochondrial membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity molecular_function
GO:0008374 O-acyltransferase activity molecular_function

KEGG:

id description
ko00564 Glycerophospholipid metabolism
ko04390 Hippo signaling pathway
ko04392 Hippo signaling pathway - multiple species
ko01004 Lipid biosynthesis proteins

ZFIN:

id description
ZDB-GENE-030131-684 Predicted to enable 1-acylglycerophosphocholine O-acyltransferase activity. Acts upstream of or within heart looping and positive regulation of heart contraction. Predicted to be located in mitochondrion. Predicted to be integral component of mitochondrial outer membrane. Predicted to be active in mitochondrial membrane. Is expressed in several structures, including endoderm; head; liver; ovary; and pericardial region. Used to study Barth syndrome and visceral heterotaxy. Human ortholog(s) of this gene implicated in Barth syndrome and dilated cardiomyopathy. Orthologous to human TAFAZZIN (tafazzin, phospholipid-lysophospholipid transacylase).

Ensembl:

ensembl_id ENSDARG00000041421

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043687 False 2736 mRNA 0.38 10 4915595 4925724
TCONS_00043688 False 1824 mRNA 0.40 11 4915966 4925641
TCONS_00043689 False 694 nonsense_mediated_decay 0.46 9 4916905 4925625
TCONS_00043690 False 827 nonsense_mediated_decay 0.47 11 4916955 4925623
TCONS_00043691 False 918 lncRNA 0.45 9 4916969 4925131
TCONS_00043692 False 1158 lncRNA 0.46 8 4917916 4925609
TCONS_00043693 False 908 lncRNA 0.37 5 4918398 4925131
TCONS_00043694 True 495 mRNA 0.47 6 4918462 4925131

Neighbor

gene id symbol gene type direction distance location
XLOC_022112 atp6ap1a coding downstream 477 4899238 ~ 4915118 (-)
XLOC_022111 slc6a1a coding downstream 60473 4834447 ~ 4855122 (-)
XLOC_022110 syn2a coding downstream 140149 4751959 ~ 4775446 (-)
XLOC_022109 cnbpa coding downstream 210342 4699144 ~ 4705253 (-)
XLOC_022108 zgc:171857 coding downstream 505927 4392147 ~ 4409668 (-)
XLOC_022114 ngfa coding upstream 3718 4929442 ~ 4975517 (-)
XLOC_022115 kcna2b coding upstream 84240 5009964 ~ 5032587 (-)
XLOC_022116 etv7 coding upstream 160593 5086317 ~ 5101847 (-)
XLOC_022117 FO904870.1 coding upstream 194008 5119732 ~ 5126166 (-)
XLOC_022118 NA coding upstream 265053 5190777 ~ 5199754 (-)
XLOC_022102 NA non-coding downstream 1184989 3728090 ~ 3730606 (-)
XLOC_022098 NA non-coding downstream 1464216 3450998 ~ 3451379 (-)
XLOC_022096 AL954726.1 non-coding downstream 1859499 3055981 ~ 3056096 (-)
XLOC_022095 NA non-coding downstream 1923488 2960218 ~ 2992107 (-)
XLOC_022093 NA non-coding downstream 2071341 2842399 ~ 2844254 (-)
XLOC_022119 CR936540.1 non-coding upstream 285297 5211021 ~ 5365345 (-)
XLOC_022120 dre-let-7a-5 non-coding upstream 505472 5431196 ~ 5431319 (-)
XLOC_022121 dre-let-7e non-coding upstream 505694 5431418 ~ 5431517 (-)

Expression


Co-expression Network