XLOC_022116 (etv7)


Basic Information

Item Value
gene id XLOC_022116
gene name etv7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 5086317 ~ 5101847 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043703
ATTTCCCGGAAGGATTCTGTATATTGCAGGCGCTTAAGAAAAGCAATAAGTCCGCTGCGCAAGATTACGACTTTTCACTActctacatgtatttatttagtgtatCTTTTGACCATTCACTGACATTATAATCGGCAAATACTATCGTAGCGCATTTTTTAGAAGAGTGTGTCAAGTCAAGGTTAAAGAACATGAGTGACGCCTCTTCACCGCCACCTTTAATAAAGCTTCAGCATGGCTGTAATGGGAACAATTCTTCAGTCTGCTCCACAACTCTGCCCGACCCTCAGAATGAACCTTCCTCCGTCTCTGAGGCGGTGCCTGAAGAACTGTGCAAACTGCCAGGACGATTACGCATCAATCCTTCTTTGTGGAATAAGGAGGATGTGAATCTGTGGCTGCGCTGGGCTCAGAGGGAGTACTCTCTGCGGCGTGCAGACCACCAGGGATTCGAGATGAATGGAAAAGCACTGTGCCTCCTCACCAAAGAGGACTTTCGTCTCCGCTGCCCCAGCTCTGGTGATGTTCTGTATGAACTCCTTCAACATGTGAAGCAGCAAAGGAGATGTGCCATCTTCAGTCCATCATCCAGCTCCGGCACACAGATCTCACACGAGACCACCACAGGTCCTTATGTTCCCTCTAACAAAAGTGTTCCTGTGTGTCCTGTGAACCCAAATTCTCGGGCGGTTTCAGCTGGATGCAGCACAGCTCAGATGCAGGACAGAACACACTTGTTTGCTGACCCTGAGCATCCACAAGACATGCAAACagAGATTTTCCATCATTCGCTCAAAGAAAAAATGCCACAGATATCTCCTGACAAAAGCAGACAGGCTATAACTGTTTCCAGTACAGAGGAGCCTCTCAACCTGTCCAATAAACCTGAAAGACCTGCCAAAAACACACAACCCTCTGAGGCCACAGGAAGAATTCCAGACTGTAAGCTCTTATGGGACTATGTGTACCAGCTGCTGTCTGACAGCAGATATGAAGCCTTCATACGCTGGGAAGATCCAAACGACATGATCTTCAGAGTTGTGGATCCCAACGGACTGGCACGACTCTGGGGAAACCACAAGAACAGAGCAAACATGACCTATGAGAAAATGTCTAGAGCTCTTCGTCATTACTACAAGCTCAATATCATCAAGAAAGAGACCGGCCAGAGGCTGCTGTTTCGGTTCCTGAAGACCCCTGAGGAAATAATACAAGGCAGGTCAGACCGTGCAGAAGTGCCTGAGTCTCCAGACAGCCCTGTGTCTCCGGACTACAGAGAAGAAGCTCTGGAAGTGTCCCCTGCATCGACTCCTACTACCCTGAGCCCCAGCTCTGATCACAACTTCTGCATATCACCAATTCCATGACACTAACTACTTCATTCTGATCCAGAATCAGCCTAAGTAACTAATTAACCTGACCTTTAAGCTTGTGGAAACCCCAAATATGGAACAATGTGAACTACAGACTGCTATCTACAGCCCCAAAGATTTCTGAGATGTACTCAGTAATATTTTAAGAGGACTAAACACAGCACAGGTTTGACTCAGGGTAGAACTATGTCATTAGTAGTTGTGGGGTTGTGTTAAATGTTTATGACACTAATTCCACTGATTTTCATGATGTTTGGAGACAATATGAAACGTTTTCTCAGGTTGTAAAACTGTGCAATGTAAATTTTCGAGATCTGAGAACTGCACTGCATCATTCACATATATATTGAACATTAATCAAATAATAGTAATCTGTATAGTAAAATCAATgagttaattaattgattaatcttTCAACTGTGTAAAATATGCTCATTGAAATGTGTATAACTGCTTAAGGATTTTTTTATAAGTAAAGTCTTTCAGtaatttttgaatatttcctacagtagtttaaataaatgaaaaatcccATATG

Function

symbol description
etv7 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Acts upstream of or within erythrocyte development. Predicted to be active in nucleus. Is expressed in heart; integument; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human ETV7 (ETS variant transcription factor 7).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0030154 cell differentiation biological_process
GO:0048821 erythrocyte development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070209-53 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Acts upstream of or within erythrocyte development. Predicted to be active in nucleus. Is expressed in heart; integument; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human ETV7 (ETS variant transcription factor 7).

Ensembl:

ensembl_id ENSDARG00000089434

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043703 True 1911 mRNA 0.43 9 5086317 5101847

Neighbor

gene id symbol gene type direction distance location
XLOC_022115 kcna2b coding downstream 53730 5009964 ~ 5032587 (-)
XLOC_022114 ngfa coding downstream 110800 4929442 ~ 4975517 (-)
XLOC_022113 taz coding downstream 160593 4915595 ~ 4925724 (-)
XLOC_022112 atp6ap1a coding downstream 171199 4899238 ~ 4915118 (-)
XLOC_022111 slc6a1a coding downstream 231195 4834447 ~ 4855122 (-)
XLOC_022117 FO904870.1 coding upstream 17885 5119732 ~ 5126166 (-)
XLOC_022118 NA coding upstream 88930 5190777 ~ 5199754 (-)
XLOC_022119 CR936540.1 coding upstream 109174 5211021 ~ 5365345 (-)
XLOC_022120 dre-let-7a-5 coding upstream 329349 5431196 ~ 5431319 (-)
XLOC_022121 dre-let-7e coding upstream 329571 5431418 ~ 5431517 (-)
XLOC_022102 NA non-coding downstream 1355711 3728090 ~ 3730606 (-)
XLOC_022098 NA non-coding downstream 1634938 3450998 ~ 3451379 (-)
XLOC_022096 AL954726.1 non-coding downstream 2030221 3055981 ~ 3056096 (-)
XLOC_022095 NA non-coding downstream 2094210 2960218 ~ 2992107 (-)
XLOC_022093 NA non-coding downstream 2242063 2842399 ~ 2844254 (-)

Expression


Co-expression Network