XLOC_022136 (ftr59)


Basic Information

Item Value
gene id XLOC_022136
gene name ftr59
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 6845635 ~ 6852296 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043732
ATGGCAGAAGCTCGAGTTTTTCAAGATGAATTCATGTGTTTAGTGTGTCTGGATCTCTTGAAGGACCCGGTGACCATTCCCTGTGGACACAGTTATTGTAAGAGCTGCATTACAGGCTGCTGGGATCAAGACGATGAGAAGAGAGTCCACAGCTGCCCTCAGTGCAGAGAAACCTTCAGTCCGAGACCTGCTTTAGCTAAAAACACCATTCTGGCTGAAATAGTGGAGAAACTGAAGAAGACTAAACCTTCTGCTGACGTTTATGCTGGAGCTGGAGATGTGCAGTGTGACGTCTGTACTGAACCAAAATACAAAGCCATCAAATCCTGCCTGGTGTGTCAGGAATCTTACTGTCAAACTCATTTTGAGCGCCATGAGGAGTTTCACTCTCGTAAGCCACACAAAATGATTGACGCCACTAAACGACTGCAGGACATGATCTGCCGGAAACATGAGAAAGAGCTTGAAATGTACCATGACACTGACCAGCAGAGCATCTGTGAACTGTGTAAggattataaacaaaaaaaacacacagctgTGTCATACGCAGCACAGAGGACAGTGAAACAGAAAGAGCTGAAGGTGATGCAGATGAAGCTCCAGCACAGAGTCCTGCAGAGAGAGAAAGATCTTCAGTGTCTGAGGGCGGCTGTGGATTCTCAGAAGCTCTCTGCACAGACAGAAGTGGAGGAAACTAAGAGGATCTTTAATGAGATCATCCGCTCCATTGCGAGGCAATTGTCTAAGCTCACGCAGATGATCAGAGATCAGCGAAAGACTGCAGTGAGTGAAGCTGAAGAATTCATGAAACAACTGCAGCAGGAGATTAATGATCTGAGGAGGAGAGATGCTGAGCTGGAGCAGCTTTCACAGACACAGGATGACATGCGTTTCCTGCAGAGGTTCCAGTCTCTCTCCGTTCCTCCTGAAACTACAGATGCCTCTCTCAGTTCTATATTATTGTTTGATGACCTAAGAGAATCTGGCCATCGGCTGAAAGTCACACTGGAGAATTTCTGCAAAAAGGAGATCCAGAAGATCTCCGACAGAGTCAAACTCGCCAGCACTATCAACAACACCAGGAAGGACATCTTGCAATATTCTCAGCCGTTCACTCTGGATCCGAACACAGTGAATAAACACCTCCATCTATCTGAGAACAACAGAGTGGTTACTCGCAATAACAAGTTCCAGCTGTATCCTGaccatccagacagatttgattacCTGTGGCAGGTGTTGTGTAGAGAGAGTGTGTCCAaacgctgttactgggaggttGAGTGGAGTGGATGTGTgtatatatcagtgtcatataaaaGCATCAGCCGGAATAGTGGAGGTTATGAGTGTGGATTCGGACATAATGATCAGTCCTGGGCCCTGATCTGTCGTCCTTCCAGATACTCATTCATACACAATAACATAGAGTGTGATCTCTCTTTAAAGTCCATCAGCAGTAGAATAGGAGTgtatgtggatcacagtgcaggagtTCTGTCCTTCTACAGCGTCTCTGACACAATGAGACTCATCCAcacagtccagaccacattcaccgAGCCAGTCTGTCCTGGATTTTTTGTTCATATTGGATCATCTGTGGAACTGTGTTCATGA

Function

symbol description
ftr59 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090508-4 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000095864

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043732 True 1623 mRNA 0.46 6 6845635 6852296

Neighbor

gene id symbol gene type direction distance location
XLOC_022135 FP102169.1 coding downstream 79982 6754910 ~ 6765653 (-)
XLOC_022134 ptges3b coding downstream 95815 6736116 ~ 6749820 (-)
XLOC_022133 baz2a coding downstream 123534 6673446 ~ 6722101 (-)
XLOC_022132 CR450824.2 coding downstream 184650 6649071 ~ 6660985 (-)
XLOC_022131 mipb coding downstream 204412 6637611 ~ 6641223 (-)
XLOC_022137 ftr58 coding upstream 4173 6856469 ~ 6865962 (-)
XLOC_022138 trim35-39 coding upstream 20177 6872473 ~ 6879731 (-)
XLOC_022139 si:ch211-117c9.2 coding upstream 30114 6882410 ~ 6920107 (-)
XLOC_022140 edem2 coding upstream 96645 6948941 ~ 6982986 (-)
XLOC_022141 NA coding upstream 132376 6984672 ~ 6997683 (-)
XLOC_022129 BX323087.2 non-coding downstream 425785 6399839 ~ 6419850 (-)
XLOC_022128 NA non-coding downstream 491456 6328231 ~ 6354179 (-)
XLOC_022127 NA non-coding downstream 520721 6313582 ~ 6324914 (-)
XLOC_022121 dre-let-7e non-coding downstream 1414118 5431418 ~ 5431517 (-)
XLOC_022120 dre-let-7a-5 non-coding downstream 1414316 5431196 ~ 5431319 (-)
XLOC_022144 NA non-coding upstream 318570 7170866 ~ 7217574 (-)
XLOC_022145 NA non-coding upstream 347947 7200243 ~ 7202861 (-)
XLOC_022146 mir1-1 non-coding upstream 357861 7210157 ~ 7210262 (-)
XLOC_022147 NA non-coding upstream 457267 7309563 ~ 7323879 (-)

Expression


Co-expression Network