G282486


Basic Information

Item Value
gene id G282486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61568709 ~ 61569133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320399
cagGCAGGCCTCTGAAGGCACAGGTGGAAAATATGATCCTAGGTGCCACACTGTGAACCACATGGCCCACACAACATGGGGGCAAAGAGGAGCACTACACTGACCTGGCACAGACTGGCTATGCTTGGACAGTTGACAACATGACAATGTTAGCTTGAGTTATCTGGGACTGAGAGCACTCTACTGTATgtcccaaaaaaaaaaaatcaacaacaacagctgAAATGAGACAAATAGCAGTTAAATCTGTAGTGAATAACAACCCGTTGTAGTGTGAACTAAGACACACTTGAGATCAAACATTAACACATTGAATGAAGAAGAACCCAACAGAGAGATTCTATGAATGCTCAATACAAATTTGAACAAAAAGGCATATCTGAGAACATTCCTTCAATTTTTGTATTACAGCCAATGTCCAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320399 True 425 lncRNA 0.41 1 61568709 61569133

Neighbor

gene id symbol gene type direction distance location
LOC110520316 itga4 coding upstream 63281 61475876 ~ 61505428 (+)
LOC110520315 ube2e3 coding upstream 197834 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 914396 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1185357 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 1282629 60277245 ~ 60286080 (+)
LOC110504376 LOC106586465 coding downstream 20925 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 79572 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 204300 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 267532 61836665 ~ 61841206 (+)
LOC110520332 LOC106586482 coding downstream 552066 62121199 ~ 62126483 (+)
G282484 NA non-coding upstream 3359 61564123 ~ 61565350 (+)
G282483 NA non-coding upstream 4977 61563464 ~ 61563732 (+)
G282481 NA non-coding upstream 7522 61560979 ~ 61561187 (+)
G282480 NA non-coding upstream 7894 61560472 ~ 61560815 (+)
G282478 NA non-coding upstream 11955 61556404 ~ 61556754 (+)
G282538 NA non-coding downstream 84417 61653550 ~ 61654197 (+)
G282560 NA non-coding downstream 124402 61693535 ~ 61698383 (+)
G282634 NA non-coding downstream 272680 61841813 ~ 61843829 (+)
G282658 NA non-coding downstream 276157 61845290 ~ 61849674 (+)
G282707 il-1rii non-coding downstream 388255 61957388 ~ 61964066 (+)
G281996 NA other upstream 531604 61033766 ~ 61037105 (+)
G281714 NA other upstream 674931 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 811359 60740239 ~ 60757350 (+)
G281141 NA other upstream 1278142 60287388 ~ 60303967 (+)
G280315 NA other upstream 1514292 60052716 ~ 60054417 (+)
LOC110520339 lrrc63 other downstream 624471 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 798481 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1137198 62705451 ~ 62712740 (+)
G284313 NA other downstream 1447193 63016326 ~ 63022591 (+)

Expression


Co-expression Network