G282538


Basic Information

Item Value
gene id G282538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61653550 ~ 61654197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320459
ACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAATACACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAACACACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAATACACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAATACACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAACACACAGGTTTTATTTATCCCATTGTACTGAATCATCAGTATGAACACACAGGTTTTATTTATCCCATTGTGCAGAGGAAGGGAAAGGGTTGGTACTGTTAATTGATGGAGGGTGTGCTGGCCCATATTCTCCTCAGAGAGAGTTTTTGGCAGAG

Function

NR:

description
uncharacterized protein LOC110499728

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320459 True 377 lncRNA 0.36 3 61653550 61654197

Neighbor

gene id symbol gene type direction distance location
LOC110504376 LOC106586465 coding upstream 6297 61590058 ~ 61647253 (+)
LOC110520316 itga4 coding upstream 148122 61475876 ~ 61505428 (+)
LOC110520315 ube2e3 coding upstream 282675 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 999237 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1270198 60382674 ~ 60383352 (+)
LOC110520324 LOC106586470 coding downstream 119236 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 182468 61836665 ~ 61841206 (+)
LOC110520332 LOC106586482 coding downstream 467002 62121199 ~ 62126483 (+)
LOC110520333 LOC106586480 coding downstream 474837 62129034 ~ 62156042 (+)
cnot11 LOC106586484 coding downstream 520388 62174585 ~ 62180282 (+)
G282486 NA non-coding upstream 84417 61568709 ~ 61569133 (+)
G282484 NA non-coding upstream 88200 61564123 ~ 61565350 (+)
G282483 NA non-coding upstream 89818 61563464 ~ 61563732 (+)
G282481 NA non-coding upstream 92363 61560979 ~ 61561187 (+)
G282480 NA non-coding upstream 92735 61560472 ~ 61560815 (+)
G282560 NA non-coding downstream 39338 61693535 ~ 61698383 (+)
G282634 NA non-coding downstream 187616 61841813 ~ 61843829 (+)
G282658 NA non-coding downstream 191093 61845290 ~ 61849674 (+)
G282707 il-1rii non-coding downstream 303191 61957388 ~ 61964066 (+)
G282712 NA non-coding downstream 327874 61982071 ~ 61982481 (+)
G281996 NA other upstream 616445 61033766 ~ 61037105 (+)
G281714 NA other upstream 759772 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 896200 60740239 ~ 60757350 (+)
G281141 NA other upstream 1362983 60287388 ~ 60303967 (+)
G280315 NA other upstream 1599133 60052716 ~ 60054417 (+)
LOC110520339 lrrc63 other downstream 539407 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 713417 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1052134 62705451 ~ 62712740 (+)
G284313 NA other downstream 1362129 63016326 ~ 63022591 (+)

Expression


Co-expression Network