G282712


Basic Information

Item Value
gene id G282712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61982071 ~ 61982481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320646
tgatatAGTGACCAGGACGTTGAGTCCCTCTAGTACGTCCATCTGTTGGAAGCGGCGTCGGCTGATTAGGGGGTAGACCTTCCCCTGACCACTACGGTCCAGCAGCATCAGACCACTCTCTGTGCCCACCAGGAGGtTCACCCCAGAGTGCTGCACACAGGATCTCAGAGTTAAACCTCTTCTTATACTTGCGGATCTCTGGGGTGTCGCTTTGTGGTCGTGTGTTGACAGGGTTCACATTGACCACGGAGCCTTTACGTGACGGGTCCGCCCTCAGTGCCTCTGCCAGCCTGGCGTCGTTCCCAAAAGC

Function

NR:

description
mitogen-activated protein kinase kinase kinase kinase 4-like isoform X11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320646 True 310 lncRNA 0.56 2 61982071 61982481

Neighbor

gene id symbol gene type direction distance location
LOC110520325 LOC106586471 coding upstream 140865 61836665 ~ 61841206 (+)
LOC110520324 LOC106586470 coding upstream 149658 61773433 ~ 61832413 (+)
LOC110520321 LOC106586467 coding upstream 318663 61648705 ~ 61663408 (+)
LOC110504376 LOC106586465 coding upstream 334818 61590058 ~ 61647253 (+)
LOC110520316 itga4 coding upstream 476643 61475876 ~ 61505428 (+)
LOC110520332 LOC106586482 coding downstream 138718 62121199 ~ 62126483 (+)
LOC110520333 LOC106586480 coding downstream 146553 62129034 ~ 62156042 (+)
cnot11 LOC106586484 coding downstream 192104 62174585 ~ 62180282 (+)
LOC110520339 lrrc63 coding downstream 210806 62193287 ~ 62200069 (+)
LOC110520341 LOC106586488 coding downstream 218350 62200831 ~ 62203750 (+)
G282707 il-1rii non-coding upstream 18005 61957388 ~ 61964066 (+)
G282658 NA non-coding upstream 132397 61845290 ~ 61849674 (+)
G282634 NA non-coding upstream 138242 61841813 ~ 61843829 (+)
G282560 NA non-coding upstream 283688 61693535 ~ 61698383 (+)
G282538 NA non-coding upstream 327874 61653550 ~ 61654197 (+)
G282725 NA non-coding downstream 20186 62002667 ~ 62003022 (+)
G282743 NA non-coding downstream 130579 62113060 ~ 62161959 (+)
G282805 NA non-coding downstream 130972 62113453 ~ 62121013 (+)
G282786 NA non-coding downstream 144163 62126644 ~ 62130112 (+)
G281996 NA other upstream 944966 61033766 ~ 61037105 (+)
G281714 NA other upstream 1088293 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 1224721 60740239 ~ 60757350 (+)
G281141 NA other upstream 1691504 60287388 ~ 60303967 (+)
LOC110520346 htr2a other downstream 385133 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 723850 62705451 ~ 62712740 (+)
G284313 NA other downstream 1033845 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 1143409 63124380 ~ 63129015 (+)

Expression


Co-expression Network