G282805


Basic Information

Item Value
gene id G282805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62113453 ~ 62121013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320770
gttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatacacaatccatgtctcaactgtctcaaggtctttaacctgtctcctccccttcatctgcactgattgaaatggatttaacaagtaaaaTGAATaggggatcatagcgttcacctggattcacctggtcattctatgtcatggaaagagcaggtgttcttaatgttttgtacactcagtgcatattCATTGTTTAGCTGAAATGGAATGTTCGTACCCtatatatttgactgtgatatgggGTTGTCTCACCGAGCAACCTTAGgatgaatgcacttactgtaagtcgctctggataagagcatctgctaaatgactcaaatttaaaatgtaaatgttttacatacagatctcatattactgtaaTGAATTGAGGTACCTAGCAGAACTATTTATCTGGAAGTGAAGCAGATAAACATATAGCatttagcaacaaaaaaaaaacgtgattatttgtctctctgataTTAAACCATCAAAATTTCAAACAAAGACATGTCTgccattgaacaaccccatgccatgattagataatgAAAAAATACACCAATGTTTTTCAtaatttctttaaacaataaaagctaatttaccaacatttatGAAAATGGATATAGAACGTTTTTGAATGAAACTCGTGTGCTATCATCGAACAGAGGAGCAATGAGTTCTGTGACGTGAACACTTGCGTCAATGTAACACTCAATAGTCATGCAGTGTCAAGCATATGCAAATGTTTTAATCATCGTACAGTGTGATTGCCCTGAAAATAACAGCATCAGCAAAAACAGGAATCTAGTGATGAAGAGGCCGTTTGAGAGAGATGGTGGCCTTCTAGAGGACTCTTCAGACCCTGAGGCAGTCTCAGCGCTGCACATACAAAACAAGGTTCACCCTTGATGGGGAATATGAGCATAGGCTATCAGCACTCTCTCTCattccacctctctcctttttGGCatttctttctctgcatctccCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU320770 True 1063 lncRNA 0.39 2 62113453 62121013

Neighbor

gene id symbol gene type direction distance location
LOC110520325 LOC106586471 coding upstream 272247 61836665 ~ 61841206 (+)
LOC110520324 LOC106586470 coding upstream 281040 61773433 ~ 61832413 (+)
LOC110520321 LOC106586467 coding upstream 450045 61648705 ~ 61663408 (+)
LOC110504376 LOC106586465 coding upstream 466200 61590058 ~ 61647253 (+)
LOC110520316 itga4 coding upstream 608025 61475876 ~ 61505428 (+)
LOC110520332 LOC106586482 coding downstream 186 62121199 ~ 62126483 (+)
LOC110520333 LOC106586480 coding downstream 8021 62129034 ~ 62156042 (+)
cnot11 LOC106586484 coding downstream 53572 62174585 ~ 62180282 (+)
LOC110520339 lrrc63 coding downstream 72274 62193287 ~ 62200069 (+)
LOC110520341 LOC106586488 coding downstream 79818 62200831 ~ 62203750 (+)
G282725 NA non-coding upstream 110431 62002667 ~ 62003022 (+)
G282712 NA non-coding upstream 130972 61982071 ~ 61982481 (+)
G282707 il-1rii non-coding upstream 149387 61957388 ~ 61964066 (+)
G282658 NA non-coding upstream 263779 61845290 ~ 61849674 (+)
G282634 NA non-coding upstream 269624 61841813 ~ 61843829 (+)
G282786 NA non-coding downstream 5631 62126644 ~ 62130112 (+)
G282815 LOC106575914 non-coding downstream 43870 62164883 ~ 62174362 (+)
G282822 NA non-coding downstream 48733 62169746 ~ 62171892 (+)
G282907 NA non-coding downstream 182470 62303483 ~ 62320393 (+)
G281996 NA other upstream 1076348 61033766 ~ 61037105 (+)
G281714 NA other upstream 1219675 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 1356103 60740239 ~ 60757350 (+)
G281141 NA other upstream 1822886 60287388 ~ 60303967 (+)
LOC110520346 htr2a other downstream 246601 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 585318 62705451 ~ 62712740 (+)
G284313 NA other downstream 895313 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 1004877 63124380 ~ 63129015 (+)

Expression


Co-expression Network