G283800


Basic Information

Item Value
gene id G283800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62578455 ~ 62579127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321833
TGTTGGGAAATACTTGGTGACCCaggagaaaagtgatttattctcaggatggaacattTGTCAGCAGTTGTCAGTCACACGCTTTTTTTGTCAATATAGGAAGTAGGAGATGTGACTATGCTACAACAGCTGACCCCAGATCAGAACACAGGGTTTGTAAATAGCTGTGAGGGTTGTCCTCCGGGGTGTATATCTCACACAGCTCATTAGCTCTGTCACTACTGGCAGGGGATCAAGTGGTCGGGAGGGACAGTCAGTGGGTAACAGACCTACTTGTAAAATCTACATGATTTTTCCAGACCTGGGTTTAAAATAGTAtttgtgttttctttcaaatatttAGGGTCACTTTATTTGGTTTCCACTGCGTAATGAACCATTGGAGTAGTCCAAACAGGGCGAACCCCCCCAGCTGGAGTTTTAAGGCTGGTGGAGGATGGGATAGTAGAGGACGAGTGTTGTGTTCCAACGTgggatgtagtagtagtagtagtacctgtGTGTCCTTTGAAGGTGGTGACCAGACTACAGCTGTCCTGCTCCAGCTTCAGGATGGTCACCTGACCAGAGTGGTCACCCACAAAGACGTGCCTTGTCTC

Function

NR:

description
WD repeat and FYVE domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321833 True 599 lncRNA 0.46 2 62578455 62579127

Neighbor

gene id symbol gene type direction distance location
dhrs12 LOC106586499 coding upstream 30673 62543577 ~ 62547782 (+)
rubcnl rubcnl coding upstream 36424 62534646 ~ 62542031 (+)
LOC110520349 lrch1 coding upstream 152155 62423414 ~ 62430935 (+)
LOC110520346 htr2a coding upstream 172059 62367489 ~ 62408857 (+)
LOC110520345 NA coding upstream 291637 62281719 ~ 62286818 (+)
LOC110504388 LOC106586502 coding downstream 19550 62598677 ~ 62612475 (+)
LOC110520352 LOC106586504 coding downstream 43792 62622919 ~ 62648515 (+)
LOC118964306 LOC106586506 coding downstream 119760 62698887 ~ 62701213 (+)
LOC110504398 LOC106586506 coding downstream 126324 62705451 ~ 62712740 (+)
LOC110520355 LOC105016359 coding downstream 204119 62770924 ~ 62815230 (+)
G283802 LOC106613263 non-coding upstream 771 62576483 ~ 62577684 (+)
G283779 NA non-coding upstream 60033 62516801 ~ 62518422 (+)
G282976 NA non-coding upstream 169014 62409223 ~ 62409441 (+)
G282907 NA non-coding upstream 258062 62303483 ~ 62320393 (+)
G283817 NA non-coding downstream 70360 62649487 ~ 62650344 (+)
G283833 NA non-coding downstream 75803 62654930 ~ 62655154 (+)
G283836 NA non-coding downstream 84253 62663380 ~ 62663709 (+)
G283840 NA non-coding downstream 91084 62670211 ~ 62670488 (+)
LOC110520339 lrrc63 other upstream 381504 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 616980 61957388 ~ 61964066 (+)
G281996 NA other upstream 1541350 61033766 ~ 61037105 (+)
G281714 NA other upstream 1684677 60891524 ~ 60893778 (+)
G284313 NA other downstream 437199 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 546763 63124380 ~ 63129015 (+)
G284537 NA other downstream 687992 63267119 ~ 63312394 (+)
G284599 NA other downstream 811804 63390931 ~ 63391284 (+)

Expression


Co-expression Network