XLOC_022210 (CR388373.2)


Basic Information

Item Value
gene id XLOC_022210
gene name CR388373.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 14407888 ~ 14415213 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043844
GACAGAGTCCGCTTTCACTGAAGCACATTGTCAAAGAAGCGctgtctttttaaataaactgccgattcgagtttaaaacaactacattctcgcctgaaataCTCTTAAAACTACATTTTGTGACACATTagatgatatttttttaaatttgcggGTCTTCAAAGCGGGGATTGTCCATTGACTTTCGCTTAGCATTAGCAGGCAGCCAGCAGATTTGAATTCGTGTTGTCCAATAGGATTTTGCCCGCGCCGTGCATTCATAATGCGAGCTGATTACGTGCGACGGTTAATCTCCAGCTGTTGCACTGTTTTGACGCTCTTCTCGCCGCCGATGGAGGATGGACCTGAAGGACTCAAAGAAGCTGGAATAACGTTACGCTCGTGAAGACGAAGCACAGACATTTGCAGaaaatgaaGTGGACGAGGAAGCAGTAGTGTAATAACGTGATTCCTGCAATTGGTGAGGATGCATCATCTTTTGAGGGTAATGCGAATGTCCTGCGTATCCAGTGAAATAAGtcaTGGTGAACCTGACTGAATGCATTCATCAACCATCTCCAACCAAGTCAGAGCTTCAAGGGCAGCTTGTGCTAAAGGTGCCTGAGCTTGATTAAGAAAAAAAGCATCTCCACTGGCCAAAGTCTACAAAAAAGCAGGAGAATAGAAGTTTGCAGATGATCTAACAGgtggtgcagtgggttgcacgatcgcctcacatcaagaaggttgctggttcgtgactcggctgggtcagttggcatttctgtgtggagtttgcatgttctccccatgttgacgtgggtttcctccaggtgctccagtttcctccacaagtccaagtccaacaagtccaaagacgtgctacaggtgaattggtgggatgatgatgatgctccCTACCCACCTCTACAGATGGTTGAAAGTCCTTTGCAAAGTGTTGGAGAATAGGAGTTTAAAGGCATTATTACATCCTTCGCCGTTTACTGTGTTTTCAACTTGGCTTATCCACGctacataaagaatgcaaaggATGAACATCAGCAACTCCCCGAGATGGAGCAACAATTTAAATTTGAACATCAGCAACGGTGTGAAGATGGAGATCCAAAATTACAAGAAAAACAACTCAGTGCAGCTGTCCGAGAGAACTGGTATTGCTGGGTCTGCATCAAACAGCAATGCTTGGATCTTTGCATTTACTTTTTTGCATGCGTTTCGAGTCTGCATCAGTATTTTAAGACTAGCAGCTAtagacattttaataacattgCCCAAATCAACTGAGAAGCACAAGATGACACAATGCTAAGAATTTTTTCCGCCCAACATCCTTGATGAGATTGACACATTCAGGTGTTCAAATTGAACTGTTTTTGTGAGCATGTGAGACTGCTAATGGAGAAGAAATGACTCTTTcctaatgaaatacattttaaatgtcaatactGCACTGGTTTCTGTGTGGCAAGTTTATAATACTGCTGTTGAATGATTCATATTTCCATGCAAATACACTAGGAGTTGACTTTGAATGGGGTGGTATAAACCAAGACAGACGGACTTTCAGGCTCTTGAAACATACTCTGCTGATAAActgtttaagaatgtttagaaattttaaatcaaatgtgTAATACTGTTTgatcaaatgtgtttttgagatctaaaatgaTTAAGGGTATACAGTAAGTGACATGTTTCAATTTACTGTATGGAAAAAGACTGCTTTGAGATTCTTGATGCTTTTAGAAAAATGTAGAATGCAGTGCACTAACAAAAATATACTTCATGAGGTCTAGTGCTGTTTTAGAAAGATTACTTTGTTACATTGGTAAAAATGCTCAGTGAAATGGGATGCActgatgttaaaaaataatattaagcttttttggtgtttcataaaatgttttaatgtttaagcagctatttttttaagtttatgcatCTGGTAGGACATTGTGATTAAAACTTTCATCCTCCAAAAAGGtgacaatgtaattttttttaatctttcaatgagtgtttgtgtaaaaatgttacaAGTATAAGTACAATTATTGTGCAGTTTGTACTCATggaaaaatattgctttttattattttaaaattatgtaatgtttaaacattcatcctgtaaaaatgttgatatttaatgtttaataaatgataaatgaaa

Function

GO:

id name namespace
GO:0001704 formation of primary germ layer biological_process
GO:0048729 tissue morphogenesis biological_process
GO:0043011 myeloid dendritic cell differentiation biological_process
GO:0036342 post-anal tail morphogenesis biological_process
GO:0001773 myeloid dendritic cell activation biological_process
GO:0060974 cell migration involved in heart formation biological_process
GO:0060975 cardioblast migration to the midline involved in heart field formation biological_process
GO:0007369 gastrulation biological_process
GO:0003260 cardioblast migration biological_process
GO:0003318 cell migration to the midline involved in heart development biological_process
GO:0097028 dendritic cell differentiation biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095139

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043844 True 2175 lncRNA 0.38 6 14407888 14415213

Neighbor

gene id symbol gene type direction distance location
XLOC_022209 nkain4 coding downstream 3949 14265122 ~ 14403939 (-)
XLOC_022208 ddx23 coding downstream 191382 14193547 ~ 14216506 (-)
XLOC_022206 adcy6a coding downstream 348803 13940958 ~ 14059085 (-)
XLOC_022207 BX897727.1 coding downstream 418406 13989364 ~ 13989482 (-)
XLOC_022205 g6pd coding downstream 529990 13842982 ~ 13877898 (-)
XLOC_022211 NA coding upstream 159285 14574498 ~ 14583539 (-)
XLOC_022212 NA coding upstream 320122 14735335 ~ 14738386 (-)
XLOC_022213 gss coding upstream 327874 14743087 ~ 14769523 (-)
XLOC_022214 sla2 coding upstream 393008 14808221 ~ 14990921 (-)
XLOC_022215 phf20b coding upstream 577587 14992800 ~ 15036789 (-)
XLOC_022203 NA non-coding downstream 583696 13818507 ~ 13824192 (-)
XLOC_022202 NA non-coding downstream 598291 13806359 ~ 13809597 (-)
XLOC_022201 CU929459.1 non-coding downstream 693388 13714386 ~ 13714500 (-)
XLOC_022200 CR391935.2 non-coding downstream 771981 13635793 ~ 13635907 (-)
XLOC_022217 BX537335.1 non-coding upstream 692635 15107848 ~ 15107962 (-)
XLOC_022219 NA non-coding upstream 1017200 15432413 ~ 15563597 (-)
XLOC_022220 NA non-coding upstream 1275318 15690531 ~ 15697049 (-)

Expression


Co-expression Network