LOC118964499


Basic Information

Item Value
gene id LOC118964499
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39112723 ~ 39113347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976484.1
ATGGTCCTCGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACACCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACACCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTGTCAAGCCAACTCCTCTTTTTGTTAA

Function

NR:

description
PREDICTED: keratin-associated protein 4-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976484.1 True 360 mRNA 0.53 2 39112723 39113347

Neighbor

gene id symbol gene type direction distance location
LOC118964477 NA coding upstream 116970 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 118165 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 170711 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 212847 38898435 ~ 38900534 (+)
LOC110522591 LOC105024333 coding upstream 215042 38890314 ~ 38897681 (+)
rgs6 LOC106571069 coding downstream 109364 39222711 ~ 39384500 (+)
pigh pigh coding downstream 359961 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 415080 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 450232 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 1069030 40182377 ~ 40268661 (+)
G350413 NA non-coding upstream 91272 39021232 ~ 39021451 (+)
G350407 NA non-coding upstream 96349 39016149 ~ 39016374 (+)
G350402 NA non-coding upstream 99280 39013242 ~ 39013443 (+)
G350399 NA non-coding upstream 101690 39008564 ~ 39011033 (+)
G350485 NA non-coding downstream 1427 39114774 ~ 39115485 (+)
G350495 NA non-coding downstream 33027 39146374 ~ 39146674 (+)
G350496 NA non-coding downstream 33412 39146759 ~ 39147267 (+)
G350497 NA non-coding downstream 34692 39148039 ~ 39148274 (+)
G350498 NA non-coding downstream 36711 39150058 ~ 39150287 (+)
G350211 NA other upstream 207949 38903730 ~ 38904774 (+)
G349877 NA other upstream 678699 38432179 ~ 38434024 (+)
G349855 NA other upstream 707259 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1615717 37445368 ~ 37501952 (+)
G350665 NA other downstream 274794 39388141 ~ 39389474 (+)
G351441 NA other downstream 1021340 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1876812 40990159 ~ 40990505 (+)
G352340 NA other downstream 2096900 41210247 ~ 41210998 (+)
G352341 NA other downstream 2097766 41211113 ~ 41214206 (+)

Expression


Co-expression Network