LOC118964479


Basic Information

Item Value
gene id LOC118964479
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40311638 ~ 40312681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976266.1
TGGCAAGTGTGACGCCGGGTCCAAATGCCACAGCTGAAGCAACTGCCAACCATGCCTCGGCAGAAGCGGCCCGCGCCTCAGCTGAAGCAACTGCCAACCATGCCTCAGCAGAAGCGGCTGGCCCCTGCGCCTCAGCTGGAGCAACTGCCAACCATGCCTCGGCAGAAGCGGCCCACGCCTCAGCTGGAGCAACTGCCAACCATACCTCGGCAGAAGCGGCCCGCGCCTCAGCTGGAGCAACTGCCAACCATACCTCGGCAGAAGCAGCTGGCCCCCGCACCTCGGCAGAAGCGGCCCGCGCCTCATCTGGAGCAACTGCCAACCATGTCTCGTCAGAAGCGGCCGGCCCCCGCGCCTCAGCTGAAGCAACTGCCAACCATGCCTCTGCAGAAGCGACCGGCCCCCGCGCCTCAGCTGAAGCAACTGCCAACTGTACCTCTGCAGAAGCGGCCGGCCCTCGCGCCTCAGCTGAAGCAACTGCCAACCGTACCTCTGCAGAAGCGACCGGCCCCCGCGCCTCAGCTGAAGCAACTGCCAACCATACCTCTGCAGAAGCGGCCCACGCCTCAGCTGAAGCAACTGCCAACCGTACCTCTGCAGAAGCGGCCGGCCTTGAACAGACGGCCCGACCCCTCAACAAGCTAGATAGGGAGATCATAATTTGGTTTGCCCAACTCCTTAATCGTCTTTCTCCTGTTACTGTGCCTCCATTTGAAGAAAAGGGCAAAGGTAACTGAGATGAGTAATTGTGCAAACTAATGCGCTTGTTTGAAATGAGGATCTCCTTCACTTGCGCATTGTCATGCAAATTGTTTACAGGGGTGAACGCTACAACGGTATGAATTGTTTTCAAAACCATACGACTAAAATTTACTTCTGATTTGGCTACTATTGCTGACACTTAGGCTGTACGGTTATGATTTTTATGTGTCCTGGTGTTCCTGCTACTCTTACATGATTTGTTCAGTAAACAATTTGACTTCCAAAATA

Function

NR:

description
alpha carbonic anhydrase 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976266.1 True 990 mRNA 0.56 2 40311638 40312681

Neighbor

gene id symbol gene type direction distance location
syndig1l LOC106608262 coding upstream 45949 40182377 ~ 40268661 (+)
ino80 ino80 coding upstream 659932 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 749018 39528427 ~ 39562620 (+)
pigh pigh coding upstream 833234 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 927138 39222711 ~ 39384500 (+)
LOC118936457 NA coding downstream 66853 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 78969 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 267005 40579686 ~ 40597389 (+)
paqr8 paqr8 coding downstream 313712 40626393 ~ 40630821 (+)
LOC110521109 LOC106608311 coding downstream 337973 40650654 ~ 40674839 (+)
G351466 NA non-coding upstream 41891 40233300 ~ 40269747 (+)
G351477 NA non-coding upstream 113987 40197198 ~ 40197651 (+)
G351451 NA non-coding upstream 159811 40151448 ~ 40151827 (+)
G351418 NA non-coding upstream 201156 40110253 ~ 40110482 (+)
G351626 NA non-coding downstream 9699 40322380 ~ 40453300 (+)
G351643 NA non-coding downstream 47258 40359939 ~ 40373918 (+)
G351739 NA non-coding downstream 153131 40465812 ~ 40466209 (+)
G351771 NA non-coding downstream 188243 40500924 ~ 40501156 (+)
G351773 NA non-coding downstream 189551 40502232 ~ 40502684 (+)
G351441 NA other upstream 174865 40134687 ~ 40136773 (+)
G350665 NA other upstream 922164 39388141 ~ 39389474 (+)
G350211 NA other upstream 1406864 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1413982 38890314 ~ 38897681 (+)
G349877 NA other upstream 1877614 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 677478 40990159 ~ 40990505 (+)
G352340 NA other downstream 897566 41210247 ~ 41210998 (+)
G352341 NA other downstream 898432 41211113 ~ 41214206 (+)
G352477 NA other downstream 1053520 41366201 ~ 41366607 (+)
G353125 NA other downstream 1811995 42124676 ~ 42125759 (+)

Expression


Co-expression Network