stmn4 (LOC106608277)


Basic Information

Item Value
gene id stmn4
gene name LOC106608277
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40579686 ~ 40597389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976311.1
GAGGGGCTGTGGCTGATGCTGCTGCTAGCCTGTATCCAAggggccagacagacagagaaggacaCAGACAGCCTGAAAATTGGGACCACACAggcaccaccatcatcatctcaACACTGATCTGGAGGAGGGAGCAGCATTGTGAGGATCTGAGCTAATCTCTGGTGAGGAACACAGACACATTGGAAACATGACCCTAGCAGCGTACAAAGAGAAGTTGAAAGAGCTCCCCCTGGTGTCTCTGTTCTGCTCCTGCATCAACCCTCAGACCATCGACTGTAAGCCCATATACAAAGCAGAAGATGCGGTGGATCTGGGCTGGTGTGTGATAAAGGACGTAGAGGTGATAGAGTTGAACAAACGTGCGTCGGGCCAGGCCTTCGAGGTCATCCTGAAGCCCCCGTCGTTCGATGGCGTCCCAGAGCTCAACGTTACCATGCCCCAACGCAGGGAACTCTCCATGGAGGAGATCCAGAATAAACTAGAggctgcagaggagaggaggaagTGCCAGGAGGCTGAGCTGCTGAAGCACCtggcagagaagagagagcacgagagagaggtgATCCAGAAGGCCTTTGAGGAGAACAACAACTTCATCAAGAACTCCAAGGAGAAGCTGGAGCAGAAGATGGAGGCCAACAAGGAGAACAGAGAGGCTCTGCTGGCGGCCATGTTGGAACGGCTGCAGGAGAAGGACAAACATGCAGAAGAGGTGAGGAAAAAGGTACTAGCCTTGGCAGATGTGGTGGATCTGGGCTGGTGTGTGATAAAGGACGTAGAGGTGATAGAGTTGAACAAGCGTGCGTCGGGCCAGGCCTTCGAGGTCATCCTGAAGCCTCCGTCGTTCGATGGCGTCCCAGAGCTCAACGTTACCATGCCCCAACGCAGGGAACTCTCCGTGGAGGAGATCCAGAAGAAACTAGAgggtgcagaggagaggaggaagTGCCAGGAGGCTGAGCTGCTGAAGCACCtggcagagaagagagagcacgagagagaggtgATCCAGAAGGCCTTTGAGGACAACAACAACTTCATCAAGAACGTCAAGGAGAAGCTGGAGCACAAAATGGAGGCCAACAAGAAGAACAGAGAGGCTCTGCTGGCGGCCATGTTGGAACGACTGCAGGAGAAGgaAGAACACGCATTAGAGGTGAGGAAGAAAAAAGAACTGAAGGAGGAGGCCTGCCATTAGACGAGcggaaagatagagggagagagaacggagGAGTGGTTTtgtgtcattaaaaaaaaacaagagatCAAgacaatgagggggaaaaaaagaaaacCAAAAACTGCCCCA

Function

NR:

description
stathmin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976311.1 True 1315 mRNA 0.53 8 40579686 40597389

Neighbor

gene id symbol gene type direction distance location
LOC110522596 LOC106591683 coding upstream 141878 40391650 ~ 40437808 (+)
LOC118936457 NA coding upstream 193383 40379534 ~ 40386303 (+)
LOC118964479 NA coding upstream 267005 40311638 ~ 40312681 (+)
syndig1l LOC106608262 coding upstream 313997 40182377 ~ 40268661 (+)
ino80 ino80 coding upstream 927980 39563579 ~ 39651706 (+)
paqr8 paqr8 coding downstream 29004 40626393 ~ 40630821 (+)
LOC110521109 LOC106608311 coding downstream 53265 40650654 ~ 40674839 (+)
LOC110522626 LOC106608310 coding downstream 111273 40708662 ~ 40714024 (+)
si:ch211-63o20.7 stk35 coding downstream 124137 40721526 ~ 40732661 (+)
LOC110521111 LOC106571044 coding downstream 180969 40778358 ~ 40868194 (+)
G351786 NA non-coding upstream 65577 40513718 ~ 40514109 (+)
G351773 NA non-coding upstream 77002 40502232 ~ 40502684 (+)
G351771 NA non-coding upstream 78530 40500924 ~ 40501156 (+)
G351739 NA non-coding upstream 113477 40465812 ~ 40466209 (+)
G351626 NA non-coding upstream 126386 40322380 ~ 40453300 (+)
G351789 NA non-coding downstream 223 40597612 ~ 40598001 (+)
G351790 NA non-coding downstream 1186 40598575 ~ 40601163 (+)
G351804 NA non-coding downstream 9771 40607160 ~ 40607446 (+)
G351806 NA non-coding downstream 11853 40609242 ~ 40609721 (+)
G351819 NA non-coding downstream 34896 40632285 ~ 40634563 (+)
G351441 NA other upstream 442913 40134687 ~ 40136773 (+)
G350665 NA other upstream 1190212 39388141 ~ 39389474 (+)
G350211 NA other upstream 1674912 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1682030 38890314 ~ 38897681 (+)
G349877 NA other upstream 2145662 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 392770 40990159 ~ 40990505 (+)
G352340 NA other downstream 612858 41210247 ~ 41210998 (+)
G352341 NA other downstream 613724 41211113 ~ 41214206 (+)
G352477 NA other downstream 768812 41366201 ~ 41366607 (+)
G353125 NA other downstream 1527287 42124676 ~ 42125759 (+)

Expression


Co-expression Network