G349530



Basic Information


Item Value
gene id G349530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38354317 ~ 38361596 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU395477
cacccatacagtaggttgtagtgtttattcacctatacagtaggttgtagtgtttattcacccatacatacagtaggttgtaatgtttattcacccatacatacagtaggttgtagtgtttattcacctatacagtaggttgtagtgtttattcacccatacagtaggttgtaatgtttattcacctatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtaatgtttattcacctatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacctatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattaacccatacagtaggttgtaatgtttattcacctatacagtaggttgtaatgtttattcacctatac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU395477 True 514 lncRNA 0.35 2 38354317 38361596

Neighbor


gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 62779 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 119639 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 455109 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 456793 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 475799 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 264620 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 456304 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 464187 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 528718 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 537808 38898435 ~ 38900534 (+)
G349497 NA non-coding upstream 75838 38277459 ~ 38278479 (+)
G349456 NA non-coding upstream 177991 38175489 ~ 38176326 (+)
G349446 NA non-coding upstream 211044 38142289 ~ 38143273 (+)
G349440 NA non-coding upstream 231886 38121386 ~ 38122431 (+)
G349418 NA non-coding upstream 301233 38052576 ~ 38053084 (+)
G349533 NA non-coding downstream 1773 38363369 ~ 38364394 (+)
G349856 NA non-coding downstream 44524 38406120 ~ 38406335 (+)
G349857 NA non-coding downstream 45511 38407107 ~ 38407307 (+)
G349858 NA non-coding downstream 46794 38408390 ~ 38408944 (+)
G349861 NA non-coding downstream 51770 38413366 ~ 38413583 (+)
LOC110522576 LOC106608246 other upstream 857311 37445368 ~ 37501952 (+)
G348133 NA other upstream 1193194 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2281361 36039096 ~ 36123362 (+)
G347178 NA other upstream 2445866 35908246 ~ 35908451 (+)
G347151 NA other upstream 2520473 35833369 ~ 35833844 (+)
G349855 NA other downstream 43049 38404645 ~ 38405464 (+)
G349877 NA other downstream 70583 38432179 ~ 38434024 (+)
G350211 NA other downstream 542134 38903730 ~ 38904774 (+)
G350665 NA other downstream 1026545 39388141 ~ 39389474 (+)

Expression



Co-expression Network