G349533


Basic Information

Item Value
gene id G349533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38363369 ~ 38364394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395481
agttaaaggtgatgaggtgtccacaggtagaataTCAGTTAAAGGtgatgaggtgtccacaggtagaacatcagttaaaggtggtgaggtgtccacaggtagaacatcagttaaaggtggtgaggtgtccacaggtagaacatcagttaaaggtggtgaggtgtccacaggtagaacatcagttaaaggtggagaggtgtccacaggtagaacatcagttaaaggtgatgAGGTGTctacaggtagaacatcagttaaaggtg

Function

NR:

description
PREDICTED: phosphatidate phosphatase LPIN2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395481 True 263 lncRNA 0.45 2 38363369 38364394

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 71831 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 128691 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 464161 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 465845 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 484851 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 261822 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 453506 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 461389 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 525920 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 535010 38898435 ~ 38900534 (+)
G349531 NA non-coding upstream 342 38354868 ~ 38363027 (+)
G349528 NA non-coding upstream 1224 38352696 ~ 38362145 (+)
G349530 NA non-coding upstream 1773 38354317 ~ 38361596 (+)
G349529 NA non-coding upstream 7638 38353424 ~ 38355731 (+)
G349497 NA non-coding upstream 84890 38277459 ~ 38278479 (+)
G349856 NA non-coding downstream 41726 38406120 ~ 38406335 (+)
G349857 NA non-coding downstream 42713 38407107 ~ 38407307 (+)
G349858 NA non-coding downstream 43996 38408390 ~ 38408944 (+)
G349861 NA non-coding downstream 48972 38413366 ~ 38413583 (+)
G349866 NA non-coding downstream 52759 38417153 ~ 38417407 (+)
LOC110522576 LOC106608246 other upstream 866363 37445368 ~ 37501952 (+)
G348133 NA other upstream 1202246 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2290413 36039096 ~ 36123362 (+)
G347178 NA other upstream 2454918 35908246 ~ 35908451 (+)
G347151 NA other upstream 2529525 35833369 ~ 35833844 (+)
G349855 NA other downstream 40251 38404645 ~ 38405464 (+)
G349877 NA other downstream 67785 38432179 ~ 38434024 (+)
G350211 NA other downstream 539336 38903730 ~ 38904774 (+)
G350665 NA other downstream 1023747 39388141 ~ 39389474 (+)

Expression


Co-expression Network