G349866


Basic Information

Item Value
gene id G349866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38417153 ~ 38417407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395897
GACTGCTGTACCATATGGGAGTTTGACTGCTGTAACATGGGAGTTTGACTGCTATACCATATGGGAGTTTGATTGTTGTAACCTATGGGAGTTTGACTGCTGTAACCTATGGGAGTTTGATTGTTGTAACCTATGGGAGTTTGATTGTTGTAACCTATGGGAGTTTGACTGTTGTAACCTATGGGAGTTTGACTGCTGTAACATGGGAGTTTGACTGCTGCACCATATGGGAGTTTGATTGCTATAACATGGGAG

Function

NR:

description
PREDICTED: structural maintenance of chromosomes protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395897 True 255 lncRNA 0.43 1 38417153 38417407

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 125615 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 182475 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 517945 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 519629 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 538635 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 208809 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 400493 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 408376 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 472907 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 481997 38898435 ~ 38900534 (+)
G349861 NA non-coding upstream 3570 38413366 ~ 38413583 (+)
G349858 NA non-coding upstream 8209 38408390 ~ 38408944 (+)
G349857 NA non-coding upstream 9846 38407107 ~ 38407307 (+)
G349856 NA non-coding upstream 10818 38406120 ~ 38406335 (+)
G349533 NA non-coding upstream 52759 38363369 ~ 38364394 (+)
G349881 NA non-coding downstream 19565 38436972 ~ 38438213 (+)
G349915 NA non-coding downstream 65615 38483022 ~ 38483314 (+)
G349918 NA non-coding downstream 68820 38486227 ~ 38486503 (+)
G349919 NA non-coding downstream 69775 38487182 ~ 38487568 (+)
G349943 NA non-coding downstream 124444 38541851 ~ 38542071 (+)
G349855 NA other upstream 11689 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 920147 37445368 ~ 37501952 (+)
G348133 NA other upstream 1256030 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2344197 36039096 ~ 36123362 (+)
G347178 NA other upstream 2508702 35908246 ~ 35908451 (+)
G349877 NA other downstream 14772 38432179 ~ 38434024 (+)
G350211 NA other downstream 486323 38903730 ~ 38904774 (+)
G350665 NA other downstream 970734 39388141 ~ 39389474 (+)
G351441 NA other downstream 1717280 40134687 ~ 40136773 (+)

Expression


Co-expression Network