G350244


Basic Information

Item Value
gene id G350244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38862473 ~ 38862866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396325
TCAATAGAGCCAACCCCTCTAGACTACTGTCAATAGAGCCAACCCCTCTAGTCTACTGTCAATAGAGCCAACCCCTCTAGTCTACTGTCAATAGAGCCAACCTCTCTAGTCTACTGTCAATAGAGCCAACCTCTCTAGTCTACTGTCAATAGAGCCAACCTCTCTAGTCTACTGTCAATAGAGCCAACCCCTCTAGTCTACTGTCAATAGAGCCAACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396325 True 220 lncRNA 0.47 2 38862473 38862866

Neighbor

gene id symbol gene type direction distance location
LOC110522590 NA coding upstream 41949 38817900 ~ 38820524 (+)
thbs1b LOC106608163 coding upstream 211411 38626216 ~ 38651062 (+)
LOC110522580 LOC106608254 coding upstream 570935 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 627795 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 963265 37897636 ~ 37899208 (+)
LOC110522591 LOC105024333 coding downstream 27448 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 36538 38898435 ~ 38900534 (+)
LOC110522592 LOC106608157 coding downstream 58472 38921338 ~ 38942012 (+)
LOC110521104 LOC106608154 coding downstream 97669 38960535 ~ 38994558 (+)
LOC118964477 NA coding downstream 131819 38994685 ~ 38995753 (+)
G350210 NA non-coding upstream 45085 38816347 ~ 38817388 (+)
G350206 NA non-coding upstream 53104 38808930 ~ 38809369 (+)
G350232 NA non-coding upstream 56243 38805720 ~ 38806230 (+)
G350225 NA non-coding upstream 79571 38781874 ~ 38782902 (+)
G350249 NA non-coding downstream 7843 38870709 ~ 38870993 (+)
G350253 NA non-coding downstream 17810 38880676 ~ 38882424 (+)
G350208 NA non-coding downstream 38242 38901108 ~ 38901586 (+)
G350255 NA non-coding downstream 42103 38904969 ~ 38905190 (+)
G349877 NA other upstream 428449 38432179 ~ 38434024 (+)
G349855 NA other upstream 457009 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1365467 37445368 ~ 37501952 (+)
G348133 NA other upstream 1701350 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2789517 36039096 ~ 36123362 (+)
G350211 NA other downstream 40864 38903730 ~ 38904774 (+)
G350665 NA other downstream 525275 39388141 ~ 39389474 (+)
G351441 NA other downstream 1271821 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2127293 40990159 ~ 40990505 (+)

Expression


Co-expression Network