G350249


Basic Information

Item Value
gene id G350249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38870709 ~ 38870993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396330
ctgtgacaaccggtctctatagccagactgtcctctctgggcagccaggtttgtctgtgacgaccggtctctatagccagactgtgctcactgggcagccaggttggtctgtgacgaccggtctctatagccagactgtgctcactgagtctgtacctagtcaatgttttcctcggttttctatcagtcacagtggtcagatagtctgccaccatgtactgtctgtttaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396330 True 231 lncRNA 0.52 2 38870709 38870993

Neighbor

gene id symbol gene type direction distance location
LOC110522590 NA coding upstream 50185 38817900 ~ 38820524 (+)
thbs1b LOC106608163 coding upstream 219647 38626216 ~ 38651062 (+)
LOC110522580 LOC106608254 coding upstream 579171 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 636031 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 971501 37897636 ~ 37899208 (+)
LOC110522591 LOC105024333 coding downstream 19321 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 28411 38898435 ~ 38900534 (+)
LOC110522592 LOC106608157 coding downstream 50345 38921338 ~ 38942012 (+)
LOC110521104 LOC106608154 coding downstream 89542 38960535 ~ 38994558 (+)
LOC118964477 NA coding downstream 123692 38994685 ~ 38995753 (+)
G350244 NA non-coding upstream 7843 38862473 ~ 38862866 (+)
G350210 NA non-coding upstream 53321 38816347 ~ 38817388 (+)
G350206 NA non-coding upstream 61340 38808930 ~ 38809369 (+)
G350232 NA non-coding upstream 64479 38805720 ~ 38806230 (+)
G350253 NA non-coding downstream 9683 38880676 ~ 38882424 (+)
G350208 NA non-coding downstream 30115 38901108 ~ 38901586 (+)
G350255 NA non-coding downstream 33976 38904969 ~ 38905190 (+)
G350260 NA non-coding downstream 40859 38911852 ~ 38912080 (+)
G349877 NA other upstream 436685 38432179 ~ 38434024 (+)
G349855 NA other upstream 465245 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1373703 37445368 ~ 37501952 (+)
G348133 NA other upstream 1709586 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2797753 36039096 ~ 36123362 (+)
G350211 NA other downstream 32737 38903730 ~ 38904774 (+)
G350665 NA other downstream 517148 39388141 ~ 39389474 (+)
G351441 NA other downstream 1263694 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2119166 40990159 ~ 40990505 (+)

Expression


Co-expression Network