G350260


Basic Information

Item Value
gene id G350260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38911852 ~ 38912080 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396342
ccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggcccactccgaggacacccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggctgagtatagcccacaaagacctccgccacgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU396342 True 229 lncRNA 0.55 1 38911852 38912080

Neighbor

gene id symbol gene type direction distance location
LOC118964476 NA coding upstream 11976 38898435 ~ 38900534 (+)
LOC110522591 LOC105024333 coding upstream 14171 38890314 ~ 38897681 (+)
LOC118964474 LOC106608159 coding upstream 26080 38825783 ~ 38885772 (+)
LOC110522590 NA coding upstream 91328 38817900 ~ 38820524 (+)
thbs1b LOC106608163 coding upstream 260790 38626216 ~ 38651062 (+)
LOC110522592 LOC106608157 coding downstream 9258 38921338 ~ 38942012 (+)
LOC110521104 LOC106608154 coding downstream 48455 38960535 ~ 38994558 (+)
LOC118964477 NA coding downstream 82605 38994685 ~ 38995753 (+)
LOC110521105 LOC106571085 coding downstream 123314 39035394 ~ 39190157 (+)
LOC118964499 NA coding downstream 200643 39112723 ~ 39113347 (+)
G350255 NA non-coding upstream 6662 38904969 ~ 38905190 (+)
G350208 NA non-coding upstream 10266 38901108 ~ 38901586 (+)
G350253 NA non-coding upstream 29428 38880676 ~ 38882424 (+)
G350249 NA non-coding upstream 40859 38870709 ~ 38870993 (+)
G350266 NA non-coding downstream 26933 38939013 ~ 38940316 (+)
G350270 NA non-coding downstream 43493 38955573 ~ 38993719 (+)
G350288 NA non-coding downstream 74749 38986829 ~ 38990961 (+)
G350392 NA non-coding downstream 85753 38997833 ~ 38998312 (+)
G350399 NA non-coding downstream 96484 39008564 ~ 39011033 (+)
G350211 NA other upstream 7078 38903730 ~ 38904774 (+)
G349877 NA other upstream 477828 38432179 ~ 38434024 (+)
G349855 NA other upstream 506388 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1414846 37445368 ~ 37501952 (+)
G350665 NA other downstream 476061 39388141 ~ 39389474 (+)
G351441 NA other downstream 1222607 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2078079 40990159 ~ 40990505 (+)
G352340 NA other downstream 2298167 41210247 ~ 41210998 (+)
G352341 NA other downstream 2299033 41211113 ~ 41214206 (+)

Expression


Co-expression Network