G350288


Basic Information

Item Value
gene id G350288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38986829 ~ 38990961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396378
cctttatttaaccaggtaggccagttgagaacacctttatttcaccaggtagactagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagactagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccgggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtagactagttgagaacacctttatttaaccaggtagactagttgagaacacctttattt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396378 True 339 lncRNA 0.39 2 38986829 38990961

Neighbor

gene id symbol gene type direction distance location
LOC110522592 LOC106608157 coding upstream 44817 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 86953 38898435 ~ 38900534 (+)
LOC110522591 LOC105024333 coding upstream 89148 38890314 ~ 38897681 (+)
LOC118964474 LOC106608159 coding upstream 101057 38825783 ~ 38885772 (+)
LOC110522590 NA coding upstream 166305 38817900 ~ 38820524 (+)
LOC118964477 NA coding downstream 3724 38994685 ~ 38995753 (+)
LOC110521105 LOC106571085 coding downstream 44433 39035394 ~ 39190157 (+)
LOC118964499 NA coding downstream 121762 39112723 ~ 39113347 (+)
rgs6 LOC106571069 coding downstream 231750 39222711 ~ 39384500 (+)
pigh pigh coding downstream 482347 39473308 ~ 39478404 (+)
G350266 NA non-coding upstream 46513 38939013 ~ 38940316 (+)
G350260 NA non-coding upstream 74749 38911852 ~ 38912080 (+)
G350255 NA non-coding upstream 81639 38904969 ~ 38905190 (+)
G350208 NA non-coding upstream 85243 38901108 ~ 38901586 (+)
G350392 NA non-coding downstream 6872 38997833 ~ 38998312 (+)
G350399 NA non-coding downstream 17603 39008564 ~ 39011033 (+)
G350400 NA non-coding downstream 17955 39008916 ~ 39010648 (+)
G350402 NA non-coding downstream 22281 39013242 ~ 39013443 (+)
G350407 NA non-coding downstream 25188 39016149 ~ 39016374 (+)
G350211 NA other upstream 82055 38903730 ~ 38904774 (+)
G349877 NA other upstream 552805 38432179 ~ 38434024 (+)
G349855 NA other upstream 581365 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1489823 37445368 ~ 37501952 (+)
G350665 NA other downstream 397180 39388141 ~ 39389474 (+)
G351441 NA other downstream 1143726 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1999198 40990159 ~ 40990505 (+)
G352340 NA other downstream 2219286 41210247 ~ 41210998 (+)
G352341 NA other downstream 2220152 41211113 ~ 41214206 (+)

Expression


Co-expression Network