G350485


Basic Information

Item Value
gene id G350485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39114774 ~ 39115485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396641
tgtcgaactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactagtctacctggtgaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactggtctacctggttaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagtctacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagtcaacctggttaaataaaggtgttctcaactagtctacctggttaaataaagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396641 True 481 lncRNA 0.38 2 39114774 39115485

Neighbor

gene id symbol gene type direction distance location
LOC118964499 NA coding upstream 1427 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 119021 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 120216 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 172762 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 214898 38898435 ~ 38900534 (+)
rgs6 LOC106571069 coding downstream 107226 39222711 ~ 39384500 (+)
pigh pigh coding downstream 357823 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 412942 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 448094 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 1066892 40182377 ~ 40268661 (+)
G350413 NA non-coding upstream 93323 39021232 ~ 39021451 (+)
G350407 NA non-coding upstream 98400 39016149 ~ 39016374 (+)
G350402 NA non-coding upstream 101331 39013242 ~ 39013443 (+)
G350399 NA non-coding upstream 103741 39008564 ~ 39011033 (+)
G350495 NA non-coding downstream 30889 39146374 ~ 39146674 (+)
G350496 NA non-coding downstream 31274 39146759 ~ 39147267 (+)
G350497 NA non-coding downstream 32554 39148039 ~ 39148274 (+)
G350498 NA non-coding downstream 34573 39150058 ~ 39150287 (+)
G350502 NA non-coding downstream 49703 39165188 ~ 39165516 (+)
G350211 NA other upstream 210000 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 217118 38890314 ~ 38897681 (+)
G349877 NA other upstream 680750 38432179 ~ 38434024 (+)
G349855 NA other upstream 709310 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1617768 37445368 ~ 37501952 (+)
G350665 NA other downstream 272656 39388141 ~ 39389474 (+)
G351441 NA other downstream 1019202 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1874674 40990159 ~ 40990505 (+)
G352340 NA other downstream 2094762 41210247 ~ 41210998 (+)
G352341 NA other downstream 2095628 41211113 ~ 41214206 (+)

Expression


Co-expression Network