G350495


Basic Information

Item Value
gene id G350495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39146374 ~ 39146674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396652
ATGGGAGTGTCCTGACCTAGCATGGGAGTGTCCTGACCTAGCATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGATCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGATCTAGTATGGGAGTGTCCTGATCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCCTGACCTAGTATGGGAGTGTCGTGACCTAGTATGGGAG

Function

NR:

description
histidine-rich glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396652 True 301 lncRNA 0.52 1 39146374 39146674

Neighbor

gene id symbol gene type direction distance location
LOC118964499 NA coding upstream 33027 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 150621 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 151816 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 204362 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 246498 38898435 ~ 38900534 (+)
rgs6 LOC106571069 coding downstream 76037 39222711 ~ 39384500 (+)
pigh pigh coding downstream 326634 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 381753 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 416905 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 1035703 40182377 ~ 40268661 (+)
G350485 NA non-coding upstream 30889 39114774 ~ 39115485 (+)
G350413 NA non-coding upstream 124923 39021232 ~ 39021451 (+)
G350407 NA non-coding upstream 130000 39016149 ~ 39016374 (+)
G350402 NA non-coding upstream 132931 39013242 ~ 39013443 (+)
G350399 NA non-coding upstream 135341 39008564 ~ 39011033 (+)
G350496 NA non-coding downstream 85 39146759 ~ 39147267 (+)
G350497 NA non-coding downstream 1365 39148039 ~ 39148274 (+)
G350498 NA non-coding downstream 3384 39150058 ~ 39150287 (+)
G350502 NA non-coding downstream 18514 39165188 ~ 39165516 (+)
G350503 NA non-coding downstream 19674 39166348 ~ 39167155 (+)
G350211 NA other upstream 241600 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 248718 38890314 ~ 38897681 (+)
G349877 NA other upstream 712350 38432179 ~ 38434024 (+)
G349855 NA other upstream 740910 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1649368 37445368 ~ 37501952 (+)
G350665 NA other downstream 241467 39388141 ~ 39389474 (+)
G351441 NA other downstream 988013 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1843485 40990159 ~ 40990505 (+)
G352340 NA other downstream 2063573 41210247 ~ 41210998 (+)
G352341 NA other downstream 2064439 41211113 ~ 41214206 (+)

Expression


Co-expression Network