G351441


Basic Information

Item Value
gene id G351441
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40134687 ~ 40136773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397710
tggtagtagtagtagtggtggtagtagtagtagtagtggtagtagtagtggtagtagtagtagtagtagtagtggtagtagtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtggtagtgatattagtagtagtagtagtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtagtggtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtagtagtagtagtagtagtagtagtggtagtagtagtagtagtggtagtagtagtagtagtagtagtagtagtagtagtggtggtagtggtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtggtagtagtggtagtaatagtagtagtagtggtagtagcagtactagcagtagtagtaatgatgatggtggtggtagtggtagtagtagtagttgtagtggtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtagtagtagttgtactagtagtggtagtagtggtggtagtagtagtgatagttgcagtagtagtagtagtagtggttgtagtagtgatagtagttgtggtagtaatagtggtagtagtagtagttgtggtggtagtggtagtggtagtagtagtagtggcggtcgtagttgtggtagtggtagtagtagtagtaatgatggtagtagtagtggtggtagtagtatacAATGTGTAACGTTAACtaccgagtccatgtgcaggggtatgaggtaattgaggtagatgtgtacatataggtacgggtaaagtgactaggcaacaggatagataataatcaGTAACAACAGTGTCTGTGATGAGTctaaagagttagtgcaaaaaaaggtcAATGCAAGATAGTCTGGGTATTGGTTATCTATTTAAactacaatatgtaactttttgggtgtcccgaccaaattcacatagaattgTGAGTTTTAGattggtagatctgttc
>TU397708
tagtagtagtagtagtagtggtagtagtggtagtagtagtagtagtagtagtagtagtggtggtagtggtagtagtagtagtagtagtagtggtagtagtagtagtggtagtagtagtagtagtggtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtagtagtagtagtagtggtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtagtagtagtagtagtagtagtagtggtagtagtagtagtagtggtagtagtagtagtagtagtagtagtagtagtagtggtggtagtggtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtggtagtagtggtagtaatagtagtagtagtggtagtagcagtactagcagtagtagtaatgatgatggtggtggtagtggtagtagtagtagttgtagtggtagtagtagtagtagtagtagtagtggtagtagtagtagtagtagtggtagtagtagtagtagttgtactagtagtggtagtagtggtggtagtagtagtgatagttgcagtagtagtagtagtagtggttgtagtagtgatagtagttgtggtagtaatagtggtagtagtagtagttgtggtggtagtggtagtggtagtagtagtagtggcggtcgtagttgtggtagtggtagtagtagtagtaatgatggtagtagtagtggtggtagtagtatacAATGTGTAACGTTAACtaccgagtccatgtgcaggggtatgaggtaattgaggtagatgtgtacatataggtacgggtaaagtgactaggcaacaggatagataataatcaGTAACAACAGTGTCTGTGATGAGTctaaagagttagtgcaaaaaaaggtcAATGCAAGATAGTCTGGGTATTGGTTATCTATTTAAactacaatatgtaactttttgggtgtcccgaccaaattcacatagaattgTGAGTTTTAGattggtagatctgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397710 False 1058 TUCP 0.39 4 40134687 40136773
TU397708 True 1043 TUCP 0.39 4 40134966 40136773

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 482981 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 572067 39528427 ~ 39562620 (+)
pigh pigh coding upstream 656283 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 750187 39222711 ~ 39384500 (+)
LOC110521105 LOC106571085 coding upstream 947823 39035394 ~ 39190157 (+)
syndig1l LOC106608262 coding downstream 45604 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 174865 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 242761 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 254877 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 442913 40579686 ~ 40597389 (+)
G351418 NA non-coding upstream 24205 40110253 ~ 40110482 (+)
G351322 NA non-coding upstream 107869 40026617 ~ 40026818 (+)
G351312 NA non-coding upstream 114294 40020139 ~ 40020393 (+)
G351307 NA non-coding upstream 118878 40015157 ~ 40015809 (+)
G351294 NA non-coding upstream 148435 39986032 ~ 39986252 (+)
G351451 NA non-coding downstream 14675 40151448 ~ 40151827 (+)
G351477 NA non-coding downstream 60425 40197198 ~ 40197651 (+)
G351466 NA non-coding downstream 96527 40233300 ~ 40269747 (+)
G351626 NA non-coding downstream 185607 40322380 ~ 40453300 (+)
G350665 NA other upstream 745213 39388141 ~ 39389474 (+)
G350211 NA other upstream 1229913 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1237031 38890314 ~ 38897681 (+)
G349877 NA other upstream 1700663 38432179 ~ 38434024 (+)
G349855 NA other upstream 1729223 38404645 ~ 38405464 (+)
G352136 LOC106608303 other downstream 853386 40990159 ~ 40990505 (+)
G352340 NA other downstream 1073474 41210247 ~ 41210998 (+)
G352341 NA other downstream 1074340 41211113 ~ 41214206 (+)
G352477 NA other downstream 1229428 41366201 ~ 41366607 (+)
G353125 NA other downstream 1987903 42124676 ~ 42125759 (+)

Expression


Co-expression Network