adra1ab (LOC106565247)


Basic Information

Item Value
gene id adra1ab
gene name LOC106565247
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34436786 ~ 34448792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602552.2
AGCAGACAGATTCCTCAGGGAGCTACACCGGGTGTGTGCGTCTCGACATAACAGCCATAAATAGCCTACCGTCTGAATAGTTTGTCCAGTCCATACGAAAAATACATTTGCTTTGATCATACTTGTACTGTCAAAGAACGGTACTCGTTTGGGAGGCATTTAGGGATAACAAGTGGGACTTCTGTTCAATGAAAACATCCCTCCAGCAAGTTTCTATCATGCCATTTCAGTCCCATCGTGAAAGAGACACCATAAACATATCGGATCTTGACTTTATGACCCAGAAAGCCCTGCAGCCAAACTCCAAAGACAGATGGCGCAACAAGCAGTGGCAGTGCTGAAGATTCACTATCCTGACCTGTCAGTGTTTTTAATGTTACTGCCAAAGACATGTGTTTTATGCAGGCATTGGCAAGGGCTCATGCCTCCTAGCATGAAAGATCTGTGATTGAAAAGGTACAAACTTCTCCAGTCCTGAGTCACAAGAAGGGCAAATACAAATGGTGGACTCCCAATGCCGGTGCGGAAGTTTGCATTTAACCAAACATGACAGTCAATCCCAAAGACATTCAACTAGTGAATGAACCGTAAATAAACCCAAAATGGTTCCCTCAGATGAGAACATCACGTTCCCTGTGTCAGAAAGCTGTCCCAACTGCAGTTCCTCCTCCTTCGCTGAGGTGGATATCACTAAGGCGGTGACCCTGGGCCTGGTGATGGGGGTGTTTGTCATCTTCGGGGTTCTCGGTAACATCCTGGTTATCCTGTCTGTGGTGTGCCACCACCACCTACGCTCCGTCACACACTACTTCATCGCCAACCTTGCGGCAGCAGACCTGCTCCTGAGCTCCACCGTGTTGCCGTTCTCTGCCACCTCGGAGGTCCTAGGCCGCTGGGTGTTTGGCCGGTCTTTCTGCAGTGCCTGGGCCGCCCTGGATGTTCTCTGCTGCACTGCCTCTATCCTCAGCCTGTGTGTCATCTCTGTTGACCGCTACCTAGCAGTCAGCTACCCGCTGCACTACCCTGCCATGGCCACTGGGCGGCGCGGCCTGGTCGCAGTGGCAGCTCTCTGGGGCCTCTCGGCAGCCATATCCGTAGGTCCACTCTTCGGCTGGAAGGAGCCCGACCCAGAGGACGAGACTGAGTGCCGGATCACAGAGGAACCGGGTTATGCTATTTTCTCTGCCCTGGGGTCGTTCTATGTGCCACTAGCTGTCATCCTGGCCATGTATTGCAAGGTGTATGTGGTGGCCAAGCGGAAGACTCGAGAcctgagggagggaaggaagagggagggggggatgcatacggagggagagggagtgacacTGAGGATTCATCGGGGAAATGCCCCTGCTAAGCCAGAGGggcaagaggaggagggagagaaatgcATCATGAGGCGGAGACGCACCACCTTCGCCCTCATGCACCTGCTGAAATTCTCCCGAGAGAAGAGGGCAGCCAAGACTCTGGGCATTGTGGTTGGCTGCTTCGTTCTCTGCTGGCTGCCCTTCTTCCTGGTTATGCCCATTGGCTCCATATTCCCATCGTACAGGCCATCTGACACCATATTTAAGATCACCTTCTGGCTGGGCTACCTCAACAGCTGTATCAACCCCATTATCTATCCCTGCTTCAGCCAGGAGTTCCAGAGGGCCTTCCTCAACGTTCTGCATGGACGCTGCCTCAGACAGGGTGGCAGGAGCTCCAAGTCTCTGGGGTTTGCTCCTTCCTATAGTCCCAGTCCTGGTCCATCGTCTCTTTTTAGATCCCAGCCtcacgcctcctcctcctccaccccccctacCCAGCCACGCCGAGCCGCCTCCCCAGCCTCTCAtgcctcctcctcagcctctcacGACTCCTCCTCAGGCTGCTGGAGGACCTTCTCTGGCTCATCTTCCTCGGTGGGGGTGCCAGGCCATACCCAAAGTACCCGGGTCCACAGTAAAAGCCTGCTGAAGGTGTGGTGTTTTGCAGCGGGGGAGAACCCGTCCCAACAGGGTGCTGCTTGCCTGAGCCCCTCAGCCCCTGGTGCTACATGTCAAACGAAAGTCCATTGCCACTCCCTGGGAGCAAGAGGGGAGGCTGTCTGACTGGGAACACTAAAGGATTCTGGGTAATTAAAATTTCCCCCAAGTTCTGGGAAAAGATGTGGCACTTATTGGCATGAAGTTAAGACATCTCTCTCGAGACCTGCTGGAATCAGTCAGTACAGCTATTGACATAAAGCTGATGTGTCTTCATGTTTTGGGAAATGGGAGAGAGTACACCCACTGAAGAAGATACTGTAACACACCTGAAGGtagagatgtactgtactgtatgtgcttcACTGTagatgtatgtacagtatgaatcAAAAGGATACACAGTGTCAGTACAGAAACTGAATAAAGAGTACTGAGTCAGTAAAGAGACCAGAGTTGGGGAGTAGCTGATTACATGTAACTGCAATCAATTATgttaccagctaaaatattgtaatcagattacagatactttagaaaaactagattacttcttggattacttttaaattcagaaaggctGTTTGCGAAAAAATACATTATGatacctttctgttttctcaaatcaaaataaaatcaaatttaatttgtcacatgcgccgaatacaacaggtgtagacctaactgtgaaatgcttacttacaagcccttaattaa

Function

NR:

description
alpha-1A adrenergic receptor-like

GO: NA

KEGG:

id description
K04135 ADRA1A; adrenergic receptor alpha-1A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602552.2 True 2693 mRNA 0.51 3 34436786 34448792

Neighbor

gene id symbol gene type direction distance location
si:ch211-127i16.2 LOC106565287 coding upstream 289460 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 347802 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 403946 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 592665 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 637072 33640488 ~ 33799714 (+)
LOC110523660 LOC106565209 coding downstream 638034 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 905306 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1019148 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 1033436 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 1097753 35546545 ~ 35595618 (+)
G393117 LOC106565272 non-coding upstream 14997 34413404 ~ 34421789 (+)
G393107 LOC106565253 non-coding upstream 38428 34397355 ~ 34398358 (+)
G393094 NA non-coding upstream 58400 34376995 ~ 34378386 (+)
G393092 NA non-coding upstream 61218 34375258 ~ 34375568 (+)
G393090 NA non-coding upstream 65434 34370981 ~ 34371352 (+)
G393185 NA non-coding downstream 66323 34515115 ~ 34517457 (+)
G393208 NA non-coding downstream 102149 34550941 ~ 34612776 (+)
G393248 NA non-coding downstream 163170 34611962 ~ 34679537 (+)
G393367 NA non-coding downstream 333600 34782392 ~ 34785490 (+)
G393726 NA non-coding downstream 407984 34856776 ~ 34857092 (+)
G392776 NA other upstream 288085 34147474 ~ 34150795 (+)
G391805 NA other upstream 1075445 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1273806 33158826 ~ 33162980 (+)
G390393 NA other upstream 2216253 32220181 ~ 32220533 (+)
G390184 NA other upstream 2476041 31960355 ~ 31960745 (+)
G394882 NA other downstream 1456320 35905112 ~ 35905781 (+)
G394910 NA other downstream 1518145 35966937 ~ 36004829 (+)
you2 you2 other downstream 1584468 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1754109 36202901 ~ 36206616 (+)
G395034 NA other downstream 1831508 36280300 ~ 36301290 (+)

Expression


Co-expression Network