LOC110523711 (LOC106564742)


Basic Information

Item Value
gene id LOC110523711
gene name LOC106564742
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 36607402 ~ 36614580 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602650.2
TAATGTAGCCTGCCCTAGTGTAACCACAAAGGGGTGGGACCGAAAACTCTTTATGCCATCCACTGTGTTGCGTTTTAACGGCCGACGTTCGCAGAAGAGAGCTTCCTTTCGGTCTTCCTCATTTGAAAAGATAGGTCGTTTTTACTGTCTATAGGCTTTTCCCATCTCTCTTGCTCACGTTTGGAAACTCAATCTCACTGGCATAATGGCAGCGATTGGCAACCGTGGAACTGTGACTGAAGCCGCTGGCTTcaaggtagaggaggatgtaAACAGACTGAGAGGAGCCATGAAGGGGGCTGGCACGGACGAGGCAGCTGTCATTGAGGTCCTGGCACGTCGTAGCATTGCTCAGAGGCAACGCATCAAGGAGGTTTACAAGCAGACCGTGGGGAAGGACCTGACCGATGATCTGCAGGGAGAGCTGACGGGGAACTTTGAGAACGTGGTGCTGGGCCTCCTGATGACCGCTCCTGTGTATGATGCCTACGAGCTGAGGAACGCTATGAAGGGTGCTGGAACAGAGGAGGCTGCTCTCATTGATATCCTTGCCTCAAGGACGAACGCTGAAATTAGAGCCATCGCAGCGGTGTACATCAAAGATTATGAAAAGAACCTGGAGGAAGATATCGATGGTGATACTTCCGGAATGTTCCAGAGGGTTCTGGTCTCTTTGCTCACGGCGGGGCGAGATGAGAGCAACACTGTGGATGAGGCCCAGGCTGTGAAGGATGCTAAGGATATCTACGAGGCTGGGGAGGCTCGTTGGGGAACAGATGAAGTCAAGTTCCTCACTGTGCTCTGTGTGAGGAACAGAAATCACCTACTCCAAGTGTTTAAGGAGTATCAGAAGATCTCCGGGAGGGACATCGAGGACAGCATTAAGAGGGAGATGTCTGGCTCTCTGGAGAATGTCTTTCTGGCAATAGtgaaaTGCCTTAAAAACAAGCCAGCATTCTTTGCAGAGCGGTTATATAAATCCATGAAGGGTCTGGGAACTACAGACAGCGTACTGATTAGAATCATGGTGGCCCGGGCCGAGATTGACATGTTGGACATCAAGACCGAGTTCTTGAAAGCGTACGGCAAGACTCTCCATTCCTTCATCAAGGGAGACACATCTGGAGATTACCGCAAAATCCTGCTGGAGCTATGTGGAGAGTAGGACGTTGAACATCTAGGACATCGTTCAGCGATGACTTCACTCTGCAACAACACCATTGGTGCCTCTACTATCTTCTGTTTCCTTTGCTTAAAGGTCTCTCAATATCCTCTGCTCTTCTGTAGCCAGAGCATTTTAGACTGACCATGATGCCTTTTTTCACAGTTTGTAAAACTGATTAAACCAAAGACAGGTGACATTTTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0050819 negative regulation of coagulation biological_process
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17093 ANXA4; annexin A4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602650.2 True 1366 mRNA 0.49 13 36607402 36614580

Neighbor

gene id symbol gene type direction distance location
antxr1b LOC105014916 coding upstream 37759 36519405 ~ 36569643 (+)
LOC110523708 LOC106564755 coding upstream 137563 36458802 ~ 36469839 (+)
LOC110523704 LOC100136432 coding upstream 231014 36371366 ~ 36376388 (+)
LOC110523692 LOC106564846 coding upstream 487297 36085124 ~ 36120105 (+)
LOC110523693 ggcx coding upstream 551367 36042518 ~ 36056035 (+)
LOC110523714 LOC106565816 coding downstream 25076 36639656 ~ 36645198 (+)
LOC110522857 NA coding downstream 35368 36649948 ~ 36651750 (+)
ggt5b ggt5 coding downstream 182783 36797363 ~ 36805752 (+)
lrrc75bb LOC106564666 coding downstream 213896 36828476 ~ 36883225 (+)
LOC110523723 rnf34 coding downstream 317157 36931737 ~ 36957641 (+)
G395677 NA non-coding upstream 21523 36582772 ~ 36585879 (+)
G395672 NA non-coding upstream 30202 36573739 ~ 36577200 (+)
G395641 LOC106565823 non-coding upstream 99124 36508033 ~ 36508278 (+)
G395184 NA non-coding upstream 123181 36483995 ~ 36484221 (+)
G395165 NA non-coding upstream 150949 36456253 ~ 36456453 (+)
G395748 NA non-coding downstream 80628 36695208 ~ 36696447 (+)
G395888 NA non-coding downstream 128992 36743572 ~ 36748524 (+)
G395972 NA non-coding downstream 256238 36870818 ~ 36871028 (+)
G396058 NA non-coding downstream 391073 37005653 ~ 37036550 (+)
G395034 NA other upstream 306112 36280300 ~ 36301290 (+)
G395005 LOC106564805 other upstream 400786 36202901 ~ 36206616 (+)
you2 you2 other upstream 572635 36033260 ~ 36034806 (+)
G394910 NA other upstream 602573 35966937 ~ 36004829 (+)
G394882 NA other upstream 701621 35905112 ~ 35905781 (+)
G396022 kdm2b other downstream 350504 36965084 ~ 36965652 (+)
m17 m17 other downstream 794621 37409195 ~ 37411565 (+)
srsf9 sfrs9 other downstream 1304114 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 2699754 39297942 ~ 39317727 (+)
G399169 gpat3 other downstream 3147536 39762116 ~ 39765843 (+)

Expression


Co-expression Network