G372077


Basic Information

Item Value
gene id G372077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15843200 ~ 15845265 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422900
GTCAATGTTCTGCTGGTAACATAACTGATTAGTTAGTTCTTTGTAATCAGATTAGATGTAATTGATTACATGTTTCTCTACAACCCTGGTTATAGGCTATATTTTCCTGGTCAGGTCCGTAGTCAAAAAACTCTTGGCTGTATTGACACGGTGAGTGTGAGTCTTGACAAAAAGGCCACATCATTGTGGGATGTTTTGAGAGTTCTGAGAAAGGCTTTCTTATTCCCCCTatagaaaaataaacaaacaataatacagatgagaaatAATAAATACTGATCAATAATGGACATTTTaatcactcacatacacacaaagaGGATTAGCCAACGTATTTATGTTGGGTTTACGTGTCGTCCATTTTCTTTCGCAGATTACACATTCGTCTTTTGCTTTTAACCCCCCACATCCATGCCTGAGGGGTTGGAAGCCAGGGTCAGCCACAGTGCAGTAACCATGGAGCAGATGTGGGGGtgaagtgctttgctcaagggcacatttgaACTAGCAACCGTCCGGTTTCTGGCccgcctctctaacctctaggctacctgccgcccaagtGTCAGTCATCCGTCTCTTGCCAGTCCATGGTGAAGGAGCTGCCGGTGGTGCTGTTGTGACTGTTGTTGTCATCACAGCAGTCCTCTGCATCAGAGAAGGAGGACATgtagtggaggctggtgactctGTGGTAGCCCCCCTGGAGCACCTTGGGGAGGGCAGTCTGTTCCATGGCCCTGCGGCTGGTTCTCCTCACCGACACGCTCCACATGTCAATCAACTGGGAACACATGGCACAGCCCATGGTTGCTTTATGGAGAGGGACAAACACAGTGGACCTGACACACAAACGGTGGACTTGACACACAGTGGAGGTTAGAtgctgatatacacacacacacgttatgtcactcattcacacagacagacacaggtaaCCATTAGATACCTGATGTCACTCACACTTAttgacagacggacagacatgacagagtcaCTGACACGCACACATCTTGCACAGTGGCATAATCTGACTCAGGCCTGAGTCAGTGAGAGCGCGAGCATGGACTCAGGCCTCCAGTGAGAGCGTGAGCGTGGACTCAGGCCTCCAGTGAGAGCGCGAGCGTGGACTCAGGCCTCCAGTGAGAGCGCGAGCGTGAACTCAGGCCTCCAGTGAGAGAGCGAGCGTGTTCCCTCAGAATGTGTTTATGCCAGCACTCCTATCTGAACTCTTTGACGAGAGAGAAAGACGTGTAGCTACAATAAGAGAACAAACAGAGGGCATAAAAGAATAGAACGTTGGTTGTATGTCGACTGCAGCGGACAGCTGCCTCACATCCAACTCTGCCTCTGGGGCAGCTCTGAGGTCACCGCCAGTTGAGTCAAAGGGTTATGGATGAGCTCCCAgaactttctcttctctctcttttagtACAGATCAGATGACAGGCAGCCACACAATGTCAATATTTACATCAGCTCCATCCGTTCCAAGATGGACTGTGATGAGAAGCCTAGCTCAGCCCCTAGACAGAGGACAATATATAGGGTAGCATATGCTTCAGTGATTCTTAATTCTGCACTAGAGAACAGATATTACTCTGATCTAGAAAGTCCTTCTCTAGTGCCAGTAAGGAGGGGAAGTGTTGGACAATTCTGCTactcgttgtttattatctatgcatagtcacttcacccctgcctacatgtacaaatgacctcaactaacctgtacccccgcacactgactcggtgctggtaccccctgtatagagctttgttattgttattttgggtattttcttaactcttcttgaactgcagtgttgattaagggcttgtaagtaagcatttcacagtgaggtctacacttgttgtattcagtgcatgtgacaaataaagtttgatttgattggatattAGTCCCTCTCTCCTTCAAGTCAGTACATGGGTTATCGGCAGTATGGTTTACTATGGCTCTGAAAAGTGTTATTTTTCCAAATGTGGTGCTGGTCAGTCTTTGGTCATGGAAGAGTTGCTGTCGATGTGGGATCCTCAGGTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422900 True 2066 lncRNA 0.47 1 15843200 15845265

Neighbor

gene id symbol gene type direction distance location
c5h9orf78 cssa01h9orf78 coding downstream 28398 15810578 ~ 15814802 (-)
LOC118964750 NA coding downstream 47663 15795463 ~ 15795537 (-)
LOC118964755 NA coding downstream 47991 15795141 ~ 15795209 (-)
LOC118964756 NA coding downstream 48393 15794739 ~ 15794807 (-)
LOC118964747 NA coding downstream 48785 15794344 ~ 15794415 (-)
LOC118964568 LOC106568982 coding upstream 27513 15872778 ~ 15895178 (-)
LOC118964569 LOC106594099 coding upstream 53412 15898677 ~ 15899294 (-)
LOC110523317 LOC106568982 coding upstream 56951 15902216 ~ 15926643 (-)
garnl3 LOC106562762 coding upstream 93686 15938951 ~ 16121310 (-)
LOC118964745 NA coding upstream 358425 16203690 ~ 16205002 (-)
G372074 NA non-coding downstream 2069 15840903 ~ 15841131 (-)
G372072 NA non-coding downstream 3757 15837271 ~ 15839443 (-)
G372067 NA non-coding downstream 11248 15829076 ~ 15831952 (-)
G372061 NA non-coding downstream 19084 15823837 ~ 15824116 (-)
G372060 NA non-coding downstream 19570 15823301 ~ 15823630 (-)
G372085 ptges non-coding upstream 10455 15855720 ~ 15858353 (-)
G372087 NA non-coding upstream 15005 15860270 ~ 15860478 (-)
G372093 NA non-coding upstream 24298 15869563 ~ 15869880 (-)
G372063 LOC105015305 non-coding upstream 27563 15872828 ~ 15906228 (-)
G372102 NA non-coding upstream 71285 15916550 ~ 15917045 (-)
LOC110523302 NA other downstream 144871 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 718411 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 848041 14988147 ~ 14995197 (-)
G370635 NA other downstream 1414609 14427338 ~ 14428591 (-)
G370333 NA other downstream 1634495 14207190 ~ 14208705 (-)
G372122 NA other upstream 130341 15975606 ~ 15976116 (-)
G372123 NA other upstream 133237 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1088970 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1278772 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1643761 17483696 ~ 17521507 (-)

Expression


Co-expression Network