Gene
RNA
| Item | Value |
|---|---|
| gene id | G385686 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28140426 ~ 28140916 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU438074 | True | 491 | lncRNA | 0.32 | 1 | 28140426 | 28140916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523534 | LOC106566461 | coding | upstream | 27647 | 28109822 ~ 28112779 (+) |
| LOC110523531 | LOC106566436 | coding | upstream | 72453 | 28052621 ~ 28067973 (+) |
| si:ch211-222n4.2 | LOC106566406 | coding | upstream | 124374 | 28008073 ~ 28016052 (+) |
| LOC110523528 | nsma3 | coding | upstream | 146003 | 27982645 ~ 27994423 (+) |
| LOC118964522 | NA | coding | upstream | 399337 | 27735878 ~ 27741089 (+) |
| ftsj1 | LOC106566467 | coding | downstream | 87097 | 28228013 ~ 28235500 (+) |
| LOC110523538 | NA | coding | downstream | 98199 | 28239115 ~ 28241670 (+) |
| LOC110518653 | LOC106566474 | coding | downstream | 117051 | 28257967 ~ 28261576 (+) |
| LOC118964581 | NA | coding | downstream | 120861 | 28261777 ~ 28264335 (+) |
| ank1b | LOC106566514 | coding | downstream | 128921 | 28269837 ~ 28346918 (+) |
| G385685 | NA | non-coding | upstream | 506 | 28139438 ~ 28139920 (+) |
| G385665 | NA | non-coding | upstream | 14113 | 28125794 ~ 28126313 (+) |
| G385555 | NA | non-coding | upstream | 26989 | 28112834 ~ 28113437 (+) |
| G385592 | NA | non-coding | upstream | 31043 | 28109165 ~ 28109383 (+) |
| G385590 | NA | non-coding | upstream | 36821 | 28103228 ~ 28103605 (+) |
| G385679 | LOC106566140 | non-coding | downstream | 4901 | 28145817 ~ 28161980 (+) |
| G385675 | LOC106566140 | non-coding | downstream | 19928 | 28160844 ~ 28176961 (+) |
| G385693 | NA | non-coding | downstream | 22618 | 28163534 ~ 28178814 (+) |
| G385714 | NA | non-coding | downstream | 74564 | 28215480 ~ 28215737 (+) |
| G385715 | NA | non-coding | downstream | 76895 | 28217811 ~ 28218228 (+) |
| G385171 | LOC106566130 | other | upstream | 235695 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 433348 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 457033 | 27675352 ~ 27719165 (+) |
| G383794 | LOC106566282 | other | upstream | 1476813 | 26661838 ~ 26663613 (+) |
| LOC110522865 | LOC106567246 | other | upstream | 1679730 | 26437517 ~ 26502284 (+) |
| G385805 | NA | other | downstream | 275689 | 28416605 ~ 28417555 (+) |
| spag8 | LOC106566715 | other | downstream | 785361 | 28926263 ~ 28931410 (+) |
| tbx5a | LOC106566939 | other | downstream | 1600884 | 29741800 ~ 29763439 (+) |
| G387516 | NA | other | downstream | 1756070 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 2146035 | 30286951 ~ 30287824 (+) |
